Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M03
         (771 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    28   8.5  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.5  

>Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC434.3 protein.
          Length = 474

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 701 PLRXRXHQPDHQIPRFHTPTTPGLTSISINPLTPY*KEFAPGL 573
           P   +  Q D+ +P F+ P  PG  + S++PL P+  +++ GL
Sbjct: 37  PAPFKPRQEDYNLPPFYQPN-PGRDASSLSPLFPFHSQYSNGL 78


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = -2

Query: 683 HQPDH--QIPRFHTPTTPG---LTSISINPL-TPY*KEFAPGLKPPL--SSEAPSAYLTP 528
           H P+H   +PR  + T      L ++   P+ TP     A  L PP+  SS  P    TP
Sbjct: 446 HTPEHVCPLPRSFSSTPAAEQFLPTLEGAPVWTPSAVSTASELSPPIPMSSPPPPLPRTP 505

Query: 527 SSLGMXKGVSPPYFQVNDESQASRLISR 444
                    S PY Q+N+    +R  +R
Sbjct: 506 QPNNGLPNASLPYNQINNAGSFTRTAAR 533


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -2

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,479,249
Number of Sequences: 27780
Number of extensions: 311705
Number of successful extensions: 902
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)