Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M02
(796 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028936-1|AAH28936.1| 500|Homo sapiens IKAROS family zinc fing... 34 0.68
AY587072-1|AAS99865.1| 230|Homo sapiens helios S isoform protein. 34 0.68
AY587071-1|AAS99864.1| 454|Homo sapiens helios del(ex5)v isofor... 34 0.68
AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isofo... 34 0.68
AY587069-1|AAS99862.1| 500|Homo sapiens helios 1v isoform protein. 34 0.68
AY587066-1|AAS99859.1| 452|Homo sapiens helios del(ex6)v isofor... 34 0.68
AY008294-1|AAG22856.1| 304|Homo sapiens helios 3 protein. 34 0.68
AF130863-1|AAF09441.1| 526|Homo sapiens zinc finger DNA binding... 34 0.68
AC108066-1|AAY24327.1| 334|Homo sapiens unknown protein. 34 0.68
>BC028936-1|AAH28936.1| 500|Homo sapiens IKAROS family zinc finger
2 (Helios) protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 378 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 436
Query: 518 GHG 510
G G
Sbjct: 437 GEG 439
>AY587072-1|AAS99865.1| 230|Homo sapiens helios S isoform protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 108 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 166
Query: 518 GHG 510
G G
Sbjct: 167 GEG 169
>AY587071-1|AAS99864.1| 454|Homo sapiens helios del(ex5)v isoform
protein.
Length = 454
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 332 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 390
Query: 518 GHG 510
G G
Sbjct: 391 GEG 393
>AY587070-1|AAS99863.1| 381|Homo sapiens helios del(ex3,4) isoform
protein.
Length = 381
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 259 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 317
Query: 518 GHG 510
G G
Sbjct: 318 GEG 320
>AY587069-1|AAS99862.1| 500|Homo sapiens helios 1v isoform protein.
Length = 500
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 378 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 436
Query: 518 GHG 510
G G
Sbjct: 437 GEG 439
>AY587066-1|AAS99859.1| 452|Homo sapiens helios del(ex6)v isoform
protein.
Length = 452
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 330 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 388
Query: 518 GHG 510
G G
Sbjct: 389 GEG 391
>AY008294-1|AAG22856.1| 304|Homo sapiens helios 3 protein.
Length = 304
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 182 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 240
Query: 518 GHG 510
G G
Sbjct: 241 GEG 243
>AF130863-1|AAF09441.1| 526|Homo sapiens zinc finger DNA binding
protein Helios protein.
Length = 526
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 404 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 462
Query: 518 GHG 510
G G
Sbjct: 463 GEG 465
>AC108066-1|AAY24327.1| 334|Homo sapiens unknown protein.
Length = 334
Score = 33.9 bits (74), Expect = 0.68
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = -3
Query: 698 CLDSTPGS*HRHNPDPYTNHPRLNIHFHQSPDAVXEGVRAGVKASVVIRGSISVSHPLVT 519
CLDST + Y HP LN QSP + E V+A + + +GS+ + +
Sbjct: 212 CLDSTDSESSHDDHQSYQGHPALNPKRKQSPAYMKEDVKA-LDTTKAPKGSLKDIYKVFN 270
Query: 518 GHG 510
G G
Sbjct: 271 GEG 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,151,447
Number of Sequences: 237096
Number of extensions: 2168750
Number of successful extensions: 5012
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5012
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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