Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L22
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 36 0.030
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.16
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.36
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 30 2.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 4.5
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.9
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 29 5.9
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 36.3 bits (80), Expect = 0.030
Identities = 25/72 (34%), Positives = 26/72 (36%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGGXRXXXR 537
RGG GGS G GGR G +R G G RG GG G GG
Sbjct: 19 RGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRGGF 78
Query: 536 XXDHPXXGGFRG 501
GGF G
Sbjct: 79 GGRGSPRGGFGG 90
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 556 PPKPXXXXXXGNTPRAPNXX*XXPVSXXHLSDXCPPXLPPXPXXGXEPPCXPP 714
PP P N P P +LS PP PP P G PP PP
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -1
Query: 713 GGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGG 555
GG GG G GG GG+ +R G G G GG G+G+GG
Sbjct: 221 GGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGG----GGGGYGYGG 269
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/68 (33%), Positives = 26/68 (38%)
Frame = -1
Query: 713 GGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGGXRXXXRX 534
G GGS G GGR GG +G G G GG G+G GG R R
Sbjct: 14 GSSGGGSRGGYGGGGRGGG-----GGGYSGGRGGGYGGGGGGGYGGGGYG-GGGRGGGRG 67
Query: 533 XDHPXXGG 510
+ GG
Sbjct: 68 GSNGSAGG 75
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/73 (34%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGAR-GVXPXGGXGFGFGGXRXXX 540
RGG GG G GR + +R G R G GG GF GG R
Sbjct: 489 RGGFRGGGGDRGGFRGRSSDRGGDRGGFRGRSGDRDGGFRGGFGGRGGGGFR-GGDRGGF 547
Query: 539 RXXDHPXXGGFRG 501
R GGFRG
Sbjct: 548 R--GRGGGGGFRG 558
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/72 (29%), Positives = 27/72 (37%)
Frame = -1
Query: 713 GGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGGXRXXXRX 534
GG GG+ G GG GGQ +G G G GG G+GG +
Sbjct: 136 GGQQGGNSNAGGWGGSQGGQNGGGGRGGSG----GQGGWGGSQDGGSQGGWGGQNGGGQG 191
Query: 533 XDHPXXGGFRGS 498
+ GG G+
Sbjct: 192 GNQGGGGGRGGN 203
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGG 555
RGG HGG G GG+ C G G G G GG
Sbjct: 330 RGGRHGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGG 383
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGG 657
RGG HGG P G G GG
Sbjct: 19 RGGGHGGGYPQEGYGAAAGG 38
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGG 657
RGG HGG P G G GG
Sbjct: 19 RGGGHGGGYPQEGYGAAAGG 38
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = -1
Query: 716 RGGXHGGSXPXXGXGGRXGGQXSERXXXETGXCQXXLGARGVXPXGGXGFGFGG 555
RGG GG G GG GG+ R + G G G GG G G GG
Sbjct: 87 RGGGRGGFGGSRGGGGYDGGRGGSRGGYDGGR-----GGYG-GDRGGRGGGRGG 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,762,793
Number of Sequences: 27780
Number of extensions: 137814
Number of successful extensions: 570
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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