Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L18
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.28
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.65
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.65
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 32 0.65
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.65
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.65
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.65
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.65
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.85
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 0.85
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 0.85
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.9
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.28
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G GGG GG G G
Sbjct: 121 GGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGD 180
Query: 716 GXXGGXGGXXGXXGG 672
G GG G G GG
Sbjct: 181 GGYGGGGFGGGGMGG 195
Score = 32.7 bits (71), Expect = 0.37
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -1
Query: 884 GGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAXGXXG 705
GG G GG + G GGG GG G G G G
Sbjct: 100 GGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGG---PGGYGMGGYGGGG 156
Query: 704 GXGGXXGXXGG 672
G GG G GG
Sbjct: 157 GGGGDFGGYGG 167
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G GGG GG G G
Sbjct: 130 GGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFG 189
Query: 716 GXXGGXGGXXGXXGG 672
G GG GG G GG
Sbjct: 190 G--GGMGGYGGGMGG 202
Score = 31.5 bits (68), Expect = 0.85
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = -1
Query: 884 GGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXG--GXXXGXXXXXXXGXXAXGX 711
GG G + GG + G GGG G G G G G
Sbjct: 156 GGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGY 215
Query: 710 XGGXGGXXGXXGGXAXXXXP 651
GG G G GG P
Sbjct: 216 GGGGDGGYGPSGGYGGGYGP 235
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -2
Query: 781 GGXXGXXXGGGXXXXXXGXXRGAXGXGXGXXXGXXGGXRXXXGPXGXXGG 632
G G GGG G G G G G GG GP G GG
Sbjct: 182 GYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGG 231
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 3/78 (3%)
Frame = +1
Query: 673 PPXXPXXPPX---PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXX 843
PP P PP PP P P PP PP P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 844 XXPXXAXXXXXAPPXXXP 897
P PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 3/78 (3%)
Frame = +1
Query: 673 PPXXPXXPPX---PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXX 843
PP P PP PP P P PP PP P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 844 XXPXXAXXXXXAPPXXXP 897
P PP P
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 666 RXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPP 782
R P P P P P P P PPP P PP
Sbjct: 38 RMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPP 76
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 3/78 (3%)
Frame = +1
Query: 673 PPXXPXXPPX---PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXX 843
PP P PP PP P P PP PP P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 844 XXPXXAXXXXXAPPXXXP 897
P PP P
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +1
Query: 673 PPXXPXXPPX-----PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPP 837
PP PP PP P A P P P PPP A P A PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPP 298
Query: 838 XXXXPXXAXXXXXAPP 885
P + PP
Sbjct: 299 PPPPPRGSPPTGSLPP 314
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/99 (24%), Positives = 24/99 (24%)
Frame = +3
Query: 498 AXPXXXPXPPXXXXXXXXXRXXXPXXPPXXXXRXXXXXXXXXXXXPPXXPXGPXXXRXPP 677
A P P PP PP P P P PP
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Query: 678 XXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPPXRXG 794
P P P PR P PPP PP G
Sbjct: 291 P-PRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTG 327
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/71 (22%), Positives = 17/71 (23%)
Frame = +1
Query: 685 PXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXXXXPXXAX 864
P P PP P P P PPP P + PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 865 XXXXAPPXXXP 897
PP P
Sbjct: 293 RAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +1
Query: 673 PPXXPXXPPX-----PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPP 837
PP PP PP P A P P P PPP A P A PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPP 319
Query: 838 XXXXPXXAXXXXXAPP 885
P + PP
Sbjct: 320 PPPPPRGSPPTGSLPP 335
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/99 (24%), Positives = 24/99 (24%)
Frame = +3
Query: 498 AXPXXXPXPPXXXXXXXXXRXXXPXXPPXXXXRXXXXXXXXXXXXPPXXPXGPXXXRXPP 677
A P P PP PP P P P PP
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Query: 678 XXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPPXRXG 794
P P P PR P PPP PP G
Sbjct: 312 P-PRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTG 348
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/71 (22%), Positives = 17/71 (23%)
Frame = +1
Query: 685 PXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXXXXPXXAX 864
P P PP P P P PPP P + PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 865 XXXXAPPXXXP 897
PP P
Sbjct: 314 RAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +1
Query: 673 PPXXPXXPPX-----PPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPP 837
PP PP PP P A P P P PPP A P A PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGSPP 304
Query: 838 XXXXPXXAXXXXXAPP 885
P + PP
Sbjct: 305 PPPPPRGSPPTGSLPP 320
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/99 (24%), Positives = 24/99 (24%)
Frame = +3
Query: 498 AXPXXXPXPPXXXXXXXXXRXXXPXXPPXXXXRXXXXXXXXXXXXPPXXPXGPXXXRXPP 677
A P P PP PP P P P PP
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Query: 678 XXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPPXRXG 794
P P P PR P PPP PP G
Sbjct: 297 P-PRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTG 333
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/71 (22%), Positives = 17/71 (23%)
Frame = +1
Query: 685 PXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXXXXPXXAX 864
P P PP P P P PPP P + PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 865 XXXXAPPXXXP 897
PP P
Sbjct: 299 RAGSPPPPPPP 309
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPP 782
PP P P PP P P P P PPP P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP 76
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = +1
Query: 694 PPXPPXXPXAXXPXXXXXXXPXXXPP--XXPPPAXAXXXPXSXXXAXXPPXXXXPXXAXX 867
PP PP P P P PP PPP P PP P +
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPC 87
Query: 868 XXXAP 882
AP
Sbjct: 88 QSYAP 92
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 673 PPXXPXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXP 834
PP PP P P P P PP PPP P + P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +1
Query: 652 GXXXXAXPPXXPXXPP--XPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXP 807
G PP P PP PP P P P PP PPP P
Sbjct: 21 GCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCP--PPPMCPPPPPPPPPP 72
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 625 PXRRXAAXXGXXXXAXPPXXPXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPP 786
P RR + PP P PP P P A P P PPP
Sbjct: 255 PLRRAGSDNDLSYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPP 308
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 625 PXRRXAAXXGXXXXAXPPXXPXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPP 786
P RR + PP P PP P P A P P PPP
Sbjct: 255 PLRRAGSDNDLSYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPP 308
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPP 758
PP P P PP P P P AP P PP
Sbjct: 183 PPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPP 224
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXG---GXXXGXXXXXXXGX 726
G GG G GG G GGG G G G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 725 XAXGXXGGXGGXXGXXGG 672
+ G GG GG G GG
Sbjct: 151 SSGGCGGGGGGGCGGGGG 168
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G GGG GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 716 GXXGGXGGXXGXXGG 672
G G GG G GG
Sbjct: 86 GGGGCGGGGGGCGGG 100
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/77 (27%), Positives = 22/77 (28%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G + GG GG G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG-SSGGCGGGGGGGCGG 165
Query: 716 GXXGGXGGXXGXXGGXA 666
G GG GG GG A
Sbjct: 166 GGGGGCGGGSSGGGGYA 182
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXG---GXXXGXXXXXXXGX 726
G GG G GG G GGG G G G G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 725 XAXGXXGGXGGXXGXXGG 672
+ G GG GG G GG
Sbjct: 151 SSGGCGGGGGGGCGGGGG 168
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G GGG GG G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 716 GXXGGXGGXXGXXGG 672
G G GG G GG
Sbjct: 86 GGGGCGGGGGGCGGG 100
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/77 (27%), Positives = 22/77 (28%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G + GG GG G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG-SSGGCGGGGGGGCGG 165
Query: 716 GXXGGXGGXXGXXGGXA 666
G GG GG GG A
Sbjct: 166 GGGGGCGGGSSGGGGYA 182
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -1
Query: 884 GGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAXGXXG 705
GG G GG G G G G G G G G
Sbjct: 50 GGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGG 109
Query: 704 GXGGXXGXXGG 672
G GG G GG
Sbjct: 110 GRGGGGGGGGG 120
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPPXRXG 794
PP P P P P P P P P PPP P PP G
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP--PPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPPXRXG 794
PP P P P P P P P P PPP P PP G
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPP--PPPPPPSGAG 487
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -1
Query: 884 GGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAXGXXG 705
GG G GG G GGG GG G G G G
Sbjct: 119 GGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGG------CGGGGGGCGG 172
Query: 704 GXGGXXGXXGG 672
G GG G GG
Sbjct: 173 GGGGGCGGGGG 183
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 5/87 (5%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXG-----GXXXGXXXXXXX 732
G GG G GG A GGG G G G
Sbjct: 29 GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Query: 731 GXXAXGXXGGXGGXXGXXGGXAXXXXP 651
G G GG GG G GG A P
Sbjct: 89 GGGCGGGGGGCGGGGGCGGGCAPPPPP 115
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG G GGG GG G G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGG--GGGCGGGGGGGCGG 180
Query: 716 GXXGGXGGXXG 684
G GG GG G
Sbjct: 181 GGGGGCGGGCG 191
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 896 GXXXGGAXXXXXAXXGXXLXGGXXAXXXEXGXXXAXAGGGXXGGXXXGXXXXXXXGXXAX 717
G GG G GG GGG GG G G
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG--GGGCGGGCGGGGGG 139
Query: 716 GXXGGXGGXXGXXGG 672
G GG GG G GG
Sbjct: 140 GCGGGGGGGCGGGGG 154
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +1
Query: 673 PPXXPXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXXXXP 852
PP P P PP P P P PPP P PP P
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG---MPPPPPPRYP 356
Query: 853 XXAXXXXXAPPXXXP 897
PP P
Sbjct: 357 SAGPGMYPPPPPSRP 371
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/57 (28%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Frame = +1
Query: 673 PPXXPXXPPXPPXXPXAXX--PXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPP 837
PP P P PP P P PP PPP P PP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/88 (23%), Positives = 21/88 (23%), Gaps = 3/88 (3%)
Frame = +3
Query: 504 PXXXPXPPXXXXXXXXXRXXXPXXPPXXXXRXXXXXXXXXXXXPPXXPXG---PXXXRXP 674
P P PP P PP P G P R P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 675 PXXPXXXPXPXPXAPRXXPXXXXXXPPP 758
P P P P P P PPP
Sbjct: 357 SAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +3
Query: 636 PXXPXGPXXXRXPPXX--PXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXPP 782
P P P R PP P P P +P+ P P P P PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +2
Query: 665 PPXPRXARXXPRXXPXGPXPGXPRXXGXXXPXXXPXXXPX-PXRPXARPXXPXXXXXPXX 841
PP PR +R P P P PR P P P P P RP P P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP--PRRPPMTPPSPQRRP--PRTPPSPEP 180
Query: 842 XXXPXXPXSXXXXP 883
P P S P
Sbjct: 181 RNPPRTPPSPIPPP 194
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPP-XXPXXXPXPXPXAPRXXPXXXXXXP---PPXXXPXXPP 782
PP P P PP P P P PR P P PP P PP
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = +1
Query: 673 PPXXPXXPPXPPXXPXAXXPXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPPXXXXP 852
PP P P PP P P P PPP P PP P
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG---MPPPPPPRYP 366
Query: 853 XXAXXXXXAPPXXXP 897
PP P
Sbjct: 367 SAGPGMYPPPPPSRP 381
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/57 (28%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Frame = +1
Query: 673 PPXXPXXPPXPPXXPXAXX--PXXXXXXXPXXXPPXXPPPAXAXXXPXSXXXAXXPP 837
PP P P PP P P PP PPP P PP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/88 (23%), Positives = 21/88 (23%), Gaps = 3/88 (3%)
Frame = +3
Query: 504 PXXXPXPPXXXXXXXXXRXXXPXXPPXXXXRXXXXXXXXXXXXPPXXPXG---PXXXRXP 674
P P PP P PP P G P R P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 675 PXXPXXXPXPXPXAPRXXPXXXXXXPPP 758
P P P P P P PPP
Sbjct: 367 SAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 633 PPXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXP 770
PP P P P P P P P AP P PPP P
Sbjct: 91 PPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPP-----PPPPTPSP 131
>Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical
protein W08E3.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = -3
Query: 804 RAXGRXGXGXXXGXXXGXXXPXXRGXPGXGPXGXXRGXXRAXRGXGGTXXA 652
+A G G G G P G PG P G G A RG GG A
Sbjct: 97 KAGGAGGVGQ--AKPGGRGMPAMPGMPGMPPGGAPGGLSGAMRGHGGPGMA 145
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 636 PXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXP 779
P P P PP P P P P P P PPP P
Sbjct: 73 PPLPPPPLPLSNPPAKPT--PPPPPPKPTIRPPPIPASPPPRPPASEP 118
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 636 PXXPXGPXXXRXPPXXPXXXPXPXPXAPRXXPXXXXXXPPPXXXPXXP 779
P P P PP P P P P P P PPP P
Sbjct: 295 PPLPPPPLPLSNPPAKPT--PPPPPPKPTIRPPPIPASPPPRPPASEP 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,110,987
Number of Sequences: 27780
Number of extensions: 109979
Number of successful extensions: 1291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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