Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_L16
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0931 + 7192519-7194075                                           31   0.86 
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771...    29   6.0  

>06_01_0931 + 7192519-7194075
          Length = 518

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -2

Query: 420 WPRWRPWKQESPSAETELLLLTPVAADDSGQYLCEVSNGI-GDP 292
           WPRWRP     PS+ +     +   AD   ++LC +S  +  DP
Sbjct: 5   WPRWRPSSPPMPSSSSS-SPSSSFTADPPAEFLCPISGTLMADP 47


>06_01_0993 +
           7710016-7710977,7711081-7711316,7711422-7711501,
           7711977-7712072,7712995-7713892,7713983-7714093,
           7714657-7714751
          Length = 825

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
 Frame = -2

Query: 294 PQSASAYLNVEYPAKVTFTPTVQYLPFRLAGVVQCYIKANPPLQYVTWTKDKRLLEPYQT 115
           P     ++++EY      TP +Q     L G+  C       +   T   + ++      
Sbjct: 377 PSKLGTHISLEYLISFRLTPEIQDYLLHLKGLWLCPPPKEVEVDLSTLQPENKITREEMV 436

Query: 114 KDIVIMNNGSLL---FTRVNQNHQGRY-TCTPYN 25
           K I+I+    LL    T++N N    Y +C+  N
Sbjct: 437 KKIIIIVGEQLLLDSLTKLNYNPSEWYKSCSEVN 470


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,059,294
Number of Sequences: 37544
Number of extensions: 485044
Number of successful extensions: 1321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)