Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_L12
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478...    31   1.1  
01_01_0429 + 3254291-3254435,3254902-3255210,3255286-3256747,325...    30   2.0  
11_04_0318 + 16336356-16336358,16337254-16337484,16337580-163376...    30   2.7  
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704...    29   3.5  
08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119     29   4.6  
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874...    29   4.6  

>02_05_0890 -
           32546918-32547088,32547224-32547334,32547705-32547884,
           32547960-32548064,32548333-32548431,32548524-32548679,
           32548772-32548850,32549213-32549278,32549382-32549536,
           32549675-32550034,32550150-32550305,32550779-32550856,
           32551471-32551812
          Length = 685

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -2

Query: 263 ELDIDYIKEDLTAQALPIVSVHRMHSGRGKQPYNMILVALEPTPEAKK 120
           + D+ YIKED++A     V  HR+   R K+ Y+M L  L   P A K
Sbjct: 194 QTDLQYIKEDISA-----VERHRLELYRTKERYSMKLRMLLDEPAASK 236


>01_01_0429 +
           3254291-3254435,3254902-3255210,3255286-3256747,
           3256950-3257577
          Length = 847

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = +3

Query: 180 PPAVHPVHTNYREGLSGQILLYVVDVEFFXGLRVSLRGARGPPEEHRCGNLCSPFGGMLR 359
           PP+  P +         Q++  + D +    LR   R ARG       G+L +  GG   
Sbjct: 719 PPSSSPPYNLMPHSGEVQVVAVITDWDVRDRLRWGRRTARG-------GSLAAAGGGAAA 771

Query: 360 GPYGRPALRP 389
           GP GR AL+P
Sbjct: 772 GPPGRHALQP 781


>11_04_0318 +
           16336356-16336358,16337254-16337484,16337580-16337654,
           16337741-16337839,16339010-16339121,16339586-16339713,
           16340022-16340141,16340967-16341047,16341460-16341537,
           16341616-16341708,16341880-16341934,16342795-16342871,
           16343008-16343079,16343159-16343242,16343620-16343739,
           16343824-16343892,16344721-16344798,16345684-16345822,
           16345990-16346154,16346239-16346384,16346501-16346680,
           16346834-16346922,16346997-16347028,16347120-16347226
          Length = 810

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 361 GPMVARRCDLYLNPMRDVTRMGIINFIC-LKGLGNAVPRSF 480
           GP+   RC  Y+NP       G   FIC L G  N  PR +
Sbjct: 144 GPIRCSRCKAYINPFMRFVDQG-RRFICNLCGFSNDTPREY 183


>12_02_0118 -
           13869237-13869307,13869375-13869465,13870321-13870440,
           13870668-13870795,13871159-13871270,13871719-13871817,
           13871918-13871992,13872099-13872320,13873177-13874034
          Length = 591

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +1

Query: 361 GPMVARRCDLYLNPMRDVTRMGIINFIC-LKGLGNAVPRSF 480
           GP+   RC  Y+NP       G  +F+C L G  N  PR +
Sbjct: 426 GPIRCSRCKAYINPFMRFIDQG-KHFVCNLCGFSNDTPREY 465


>08_02_1154 - 24727668-24728275,24728503-24728844,24730216-24731119
          Length = 617

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 19/43 (44%), Positives = 20/43 (46%)
 Frame = -2

Query: 161 MILVALEPTPEAKKKIACLTTICGLSGISIEAPHKRGTPGQCY 33
           M+  A EP     KKI   TT CG   ISIE P   G    CY
Sbjct: 24  MVAAAEEPAVPTAKKIKSCTTSCG--NISIEYPF--GVEPGCY 62


>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
            26887942-26888055,26888132-26888228,26889115-26889235,
            26889306-26889390,26889494-26889643,26889871-26889987,
            26890123-26890221,26890439-26890495,26890581-26890664,
            26890759-26890828,26891015-26891169,26891557-26892095,
            26892327-26892393,26892436-26892984,26893574-26893768,
            26894485-26894569,26895822-26896441,26897154-26897486,
            26897552-26897616,26897868-26897955,26898250-26898331,
            26898720-26898796,26899152-26899256,26899496-26899630,
            26900199-26900888,26901474-26902261,26902990-26904673
          Length = 2825

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 174  FAPPAVHPVHTNYREGLSGQILLYVVDVEFFXGLRVSLRGARGPPEEH 317
            F  P +   H +      G +L Y+V +E F  L +  +G R   ++H
Sbjct: 2209 FNDPTIPKFHYSSHYSCPGTVLYYLVRIEPFTALSIQQQGGRFGQDDH 2256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,339,694
Number of Sequences: 37544
Number of extensions: 452053
Number of successful extensions: 1004
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)