Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L12
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-15|CAA19460.1| 411|Caenorhabditis elegans Hypothetical... 31 1.4
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 30 1.8
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 30 1.8
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 1.8
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 30 1.8
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 29 4.1
AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL023828-15|CAA19460.1| 411|Caenorhabditis elegans Hypothetical
protein Y17G7B.13 protein.
Length = 411
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 358 EGPMVARRCDLYLNPMRDVTRMGIINFICLKGLGNAVPRSFFLEESAGAGQLL 516
E P+ + L P D T +I+ +CL GN + F L S+ GQ+L
Sbjct: 254 EKPLEEKMISEILFPRHDATSEDLISALCLALSGNHSKKKFRLRNSSVLGQIL 306
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 536 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 584
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 536 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 584
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 394 DKGRNAGRP*GPLSIPPKGEHRFP-HLCSSGGPRAPRSDTRSPLKNSTS 251
D+ +A P PLS PPK H+ P + G P + RS T S ++S++
Sbjct: 533 DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSSRSSTSSVTRSSST 581
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 255 VEFFXGLRVSLRGARGPPEEHRCGNLCSPFGGMLRG 362
V FF L ++L G E +RC CS G L G
Sbjct: 183 VHFFSDLAINLNGFNVSYESNRCAYNCSNHGSCLNG 218
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 255 VEFFXGLRVSLRGARGPPEEHRCGNLCSPFGGMLRG 362
V FF L ++L G E +RC CS G L G
Sbjct: 183 VHFFSDLAINLNGFNVSYESNRCAYNCSNHGSCLNG 218
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 255 VEFFXGLRVSLRGARGPPEEHRCGNLCSPFGGMLRG 362
V FF L ++L G E +RC CS G L G
Sbjct: 183 VHFFSDLAINLNGFNVSYESNRCAYNCSNHGSCLNG 218
>AC024876-9|AAF60887.2| 301|Caenorhabditis elegans Hypothetical
protein Y94H6A.9a protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 297 RGPPEEHRCGNLCSPFGGMLRGPYGRPALRPLSESHARR 413
RG P+E G+ G ++GP G A P SE+H RR
Sbjct: 31 RGAPQEFYAGS-----GQAVQGPRGAAARGPDSEAHIRR 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,044,154
Number of Sequences: 27780
Number of extensions: 319218
Number of successful extensions: 648
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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