Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L10
(824 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 66 8e-12
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 65 1e-11
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 62 7e-11
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 59 7e-10
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 56 6e-09
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 53 6e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 46 5e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 46 5e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 45 2e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 44 3e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 41 2e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 35 0.016
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.80
SPAC11D3.03c |||meiotic chromosome segregation protein|Schizosac... 27 2.4
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 2.4
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 5.6
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.5
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 26 7.5
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 26 7.5
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 65.7 bits (153), Expect = 8e-12
Identities = 39/112 (34%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Frame = -1
Query: 428 IYCCP--ECQMAYREKDELEQHLSVHKIERRFICGI--CGAGLKRKEHLERHKLGHNPER 261
I+ CP EC Y LEQHL H ER F+C C RK HL+ HK H +
Sbjct: 22 IFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVK 81
Query: 260 PYVCSV--CTKGFKRREHLNLHAVLHSGVKTEIC--GECGKGFYRKDHLRKH 117
P+ C C F ++HL H +H K C C + F + LR H
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Score = 62.1 bits (144), Expect = 9e-11
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = -1
Query: 326 CGAGLKRKEHLERHKLGHNPERPYVCSV--CTKGFKRREHLNLHAVLHSGVKTEIC--GE 159
CG R LE+H H+ ERP+VC C+K F R+ HL +H H+ VK C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 158 CGKGFYRKDHLRKHTRSHESKR 93
C FY + HL +H H +
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPK 111
Score = 50.0 bits (114), Expect = 4e-07
Identities = 37/122 (30%), Positives = 46/122 (37%), Gaps = 8/122 (6%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRF-ICGICGAGLKRKEHLERHKLGHNP----ER 261
Y CP E E L H E C ICG K HL H + H +
Sbjct: 175 YSCPHESCVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERK 234
Query: 260 PYVCSV--CTKGFKRREHLNLH-AVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKRA 90
Y C + C K F R L H +V+H G C CG F K L++H K+A
Sbjct: 235 TYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKA 294
Query: 89 RE 84
+
Sbjct: 295 HK 296
Score = 43.2 bits (97), Expect = 5e-05
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 13/121 (10%)
Frame = -1
Query: 413 ECQMAYREKDELEQHLS-VHKIERRFICG----ICGAGLKRKEHLERH-KLGHNPERPYV 252
+C++ + K +L+ H++ H+ + C + G ++ L+ H + H P
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVPS---- 205
Query: 251 CSVCTKGFKRREHLNLHAVLHSGV----KTEIC--GECGKGFYRKDHLRKH-TRSHESKR 93
CS+C + FK HL H VLH KT C C K F R L+KH + HE
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 92 A 90
A
Sbjct: 266 A 266
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 161 ECGKGFYRKDHLRKHTRSHESKR 93
ECGK + R L +H R+H ++R
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNER 51
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 65.3 bits (152), Expect = 1e-11
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = -1
Query: 272 NPE--RPYVCSVCTKGFKRREHLNLHAVLHSGVKTEIC--GECGKGFYRKDHLRKHTRSH 105
NP+ RPY C +CTK F R EH H H+G K +C C K F R D L +H R H
Sbjct: 19 NPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Query: 104 ESKRAREQADAATAEKPQPANNNT 33
+ +R A AA A ++N+
Sbjct: 79 TNANSRRNAAAAAAANNSARSSNS 102
Score = 46.0 bits (104), Expect = 7e-06
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 347 RRFICGICGAGLKRKEHLERHKLGHNPERPYVCSV--CTKGFKRREHLNLHAVLHSGVKT 174
R + C +C R EH RH H E+P+VC+ C K F R + L HA +H+ +
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANS 83
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFICGI--CGAGLKRKEHLERHKLGH 273
Y CP C A+ + +H+ H E+ +C C R + L RH H
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 62.5 bits (145), Expect = 7e-11
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = -1
Query: 365 SVHKIERRFICGICGAGLK--RKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVL 192
S K + ++C G + R +L+ H H RP+ CS+C K F R+ H L
Sbjct: 562 SESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
Query: 191 HSGVKTEICGECGKGFYRKDHLRKHTRSHESKRAREQADAATAEKPQPANNNTSSIPVKK 12
H+G+K C C + F R D L +H +S + A + P +S +K
Sbjct: 622 HTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLRTATERGIQVPPSRKTAVASTSKQK 681
Score = 46.4 bits (105), Expect = 5e-06
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -1
Query: 410 CQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVCTKG 231
C + L+ H++ H R F C IC R+ RH+ H + + C C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 230 FKRREHLNLH 201
F R + LN H
Sbjct: 637 FARMDALNRH 646
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -1
Query: 419 CPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERH 285
C C+ ++ + + +H +H + F C C R + L RH
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 59.3 bits (137), Expect = 7e-10
Identities = 30/81 (37%), Positives = 38/81 (46%)
Frame = -1
Query: 443 ADGTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPE 264
ADG + C K +E H+ H +R + C +C AG R L+RH H
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 263 RPYVCSVCTKGFKRREHLNLH 201
RPYVC C K F R + LN H
Sbjct: 499 RPYVCE-CLKRFNRLDALNRH 518
Score = 54.8 bits (126), Expect = 1e-08
Identities = 26/70 (37%), Positives = 35/70 (50%)
Frame = -1
Query: 326 CGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKG 147
C + RK ++E H H +RPY C +C GF R L H +H + +C EC K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKR 508
Query: 146 FYRKDHLRKH 117
F R D L +H
Sbjct: 509 FNRLDALNRH 518
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 278 GHNPERPYVC--SVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSH 105
G + YVC + C K R+ ++ H H + C C GF R L++H R H
Sbjct: 436 GPEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Query: 104 ESKR 93
E+ R
Sbjct: 496 ENGR 499
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 56.0 bits (129), Expect = 6e-09
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Frame = -1
Query: 365 SVHKIERRFICGICGAGLKRKEHLERHKLGHNPERP----YVCSVCTKGFKRREHLNLHA 198
S+ E+ G G+ +RK ++ P P +VC C+K FKR EHL H
Sbjct: 383 SMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHI 442
Query: 197 -VLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKRAR 87
LH+ K +C CGK F R+D+LR+H R H + R
Sbjct: 443 RSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPR 479
Score = 53.6 bits (123), Expect = 3e-08
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = -1
Query: 347 RRFICGICGAGLKRKEHLERH-KLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTE 171
+ F+C C KR EHL RH + H E+P+VC +C K F RR++L H LH
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPR 479
Query: 170 I-CGECGKGFY 141
+ C G+Y
Sbjct: 480 LACFFQPSGYY 490
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -1
Query: 437 GTPIYCCPECQMAYREKDELEQHL-SVHKIERRFICGICGAGLKRKEHLERHKLGH 273
G + CPEC ++ + L +H+ S+H E+ F+C ICG R+++L +H+ H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 52.8 bits (121), Expect = 6e-08
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Frame = -1
Query: 263 RPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGE-------CGKGFYRKDHLRKHTRS- 108
+ YVC CT+ F R EHL H H+ K C E CG+ F R+D L +H +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 107 HESKRAREQADAATAEKPQPANNNTS 30
H + + R + + TA P P+ +N S
Sbjct: 128 HRNPQPRRRRRSTTA-LPNPSLSNVS 152
Score = 35.1 bits (77), Expect = 0.012
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFIC----GI---CGAGLKRKEHLERH--KLGH 273
Y C C A+ + L++H+ H E+ F C G+ CG R++ L RH K+
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHR 129
Query: 272 NPE 264
NP+
Sbjct: 130 NPQ 132
Score = 34.7 bits (76), Expect = 0.016
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 182 VKTEICGECGKGFYRKDHLRKHTRSHESKR 93
VK +C C + F R +HL++H RSH +++
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEK 96
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.4 bits (105), Expect = 5e-06
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = -1
Query: 305 KEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHL 126
K+ H+LG +P C K F R+EHL H H VK C C + F R D L
Sbjct: 13 KKRSRAHRLG-DPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 125 RKHTR 111
+H +
Sbjct: 72 NRHVQ 76
Score = 45.6 bits (103), Expect = 9e-06
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -1
Query: 401 AYREKDELEQHLSVHKI-ERRFICGI--CGAGLKRKEHLERHKLGHNPERPYVCSVCTKG 231
++ EK L++ H++ + RF C C RKEHL RH+ H + + CS C +
Sbjct: 6 SFTEKP-LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRA 64
Query: 230 FKRREHLNLH 201
F R + LN H
Sbjct: 65 FARSDVLNRH 74
Score = 39.1 bits (87), Expect = 7e-04
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 437 GTPIYCC--PECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERH 285
G P + C P+C ++ K+ L +H H+ + F C C R + L RH
Sbjct: 22 GDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 36.3 bits (80), Expect = 0.005
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -1
Query: 161 ECGKGFYRKDHLRKHTRSHESKRA 90
+C K F RK+HLR+H R+HE+ +A
Sbjct: 32 DCPKSFTRKEHLRRHERTHENVKA 55
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 46.4 bits (105), Expect = 5e-06
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 257 YVCSVCTKGFKRREHLNLHAVLHSGVKTEIC--GECGKGFYRKDHLRKHTRSH 105
Y C+ C +GF R L +H H+G + +C CGK F + ++R+H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 344 RFICGICGAGLKRKEHLERHKLGHNPERPYVCSV--CTKGFKRREHLNLHAVLH 189
R+ C C G R L+ H H ERP+VC C K F R ++ H +H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 35.1 bits (77), Expect = 0.012
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1
Query: 452 ATAADGTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGI--CGAGLKRKEHLERHKL 279
+T++ Y C EC + L+ H H ER F+C CG + ++ RH+
Sbjct: 459 STSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
Query: 278 GH 273
H
Sbjct: 519 IH 520
Score = 29.1 bits (62), Expect = 0.80
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 167 CGECGKGFYRKDHLRKHTRSHESKR 93
C EC +GF R L+ HT SH +R
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGER 494
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = -1
Query: 242 CTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKRAREQADAATA 63
CTK F R+EH H H+ K IC C F R D L +H K Q DA +
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVK----QNDAGSQ 79
Query: 62 EKPQ 51
P+
Sbjct: 80 THPK 83
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 326 CGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLH 201
C RKEH RH H + ++C C+ F R + LN H
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 32.7 bits (71), Expect = 0.065
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 410 CQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERH 285
C ++ K+ +H H + FIC C + R + L RH
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 44.0 bits (99), Expect = 3e-05
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 263 RPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICG--ECGKGFYRKDHLRKHTRSHESK 96
+ Y C C + F R+EH H H+G K C C K F R+D L +H R+H K
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 347 RRFICGICGAGLKRKEHLERHKLGHNPERPYVCSV--CTKGFKRREHLNLHAVLH 189
+ + C C R+EH RH H E+P+ CS C K F RR+ L H H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFICGI--CGAGLKRKEHLERHKLGH 273
Y CP C+ + ++ +H+ H E+ F C C R++ L RH H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -1
Query: 182 VKTEICGECGKGFYRKDHLRKHTRSHESKRARE 84
+K+ C C + F+R++H +H RSH ++ E
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFE 33
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = -1
Query: 266 ERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKH-TRSHESKRA 90
+R + C C K F R E+L H HS + C C RKD L++H R H K
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSV 87
Query: 89 REQADAATAEKPQPANNNTSSIPV 18
E+ + A+ ++ +
Sbjct: 88 IEEGSKDVLDVKAAASQQEDNMKI 111
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1
Query: 350 ERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLH 201
+R F C C R E+L RHK H+ P C C KR++ L H
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -1
Query: 440 DGTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERH 285
D ++ C +C + + L +H + H C C KRK+ L+RH
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.7 bits (76), Expect = 0.016
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = -1
Query: 203 HAVLHSGVKTEICG--ECGKGFYRKDHLRKHTRS-HESKRAREQADAATAEKPQPAN 42
H H+G K IC EC + F R D L KH R+ HE+ R A P N
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHPMHPQN 152
Score = 29.5 bits (63), Expect = 0.61
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 419 CPECQMAYREKDELEQHLSVHKIERRFICGI--CGAGLKRKEHLERH 285
CP M + L HL H E+ FIC + C R + L +H
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKH 126
Score = 29.1 bits (62), Expect = 0.80
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -1
Query: 296 LERHKLGHNPERPYVCSV--CTKGFKRREHLNLH 201
L H H E+P++CSV C + F R + L H
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKH 126
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 0.80
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 259 PTCAPSAPRASSDGNISTSTPCCTPGSRLRYAESAGKASTVRITSA 122
P + + P+ +ST+ P + SR A SAG++ST TSA
Sbjct: 1062 PPVSATRPQIPQPPPVSTALPSSSAVSRPPIATSAGRSSTAASTSA 1107
>SPAC11D3.03c |||meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 106 TRVSELASKRTRPLLRSHNLPTTILLVYP 20
T +SELAS +P +NLP + YP
Sbjct: 2 TEISELASSSQKPEKTKYNLPKPLPAYYP 30
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKE 300
Y CP C + D L S+ E F C +CG LK E
Sbjct: 136 YVCPFCNKKFSSLDVL----SLVTNEGTFACNVCGTELKDDE 173
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 263 RPYVCSVCTKGFKRREHLNLHAVLHSGVKTEI 168
+PY C VC+K +K L H HS ++ +
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRT-HSHLQVSM 427
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 598 HQSTTKQSRPSLKPFSVKTAL*E*KARK 515
+++TT++ +P +KP S+KT E K K
Sbjct: 443 YETTTQERKPVVKPDSIKTVKPEKKKSK 470
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 116 TRSHESKRAREQADAATAEKPQPANNNTSS 27
TRS E +R A A EKP + NT+S
Sbjct: 473 TRSREWRRRYRVAPPAENEKPHTSRTNTAS 502
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 206 LHAVLHSGVKTEICGECGKG 147
LH + G TEICGE G G
Sbjct: 86 LHGGIPVGQLTEICGESGSG 105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,905,098
Number of Sequences: 5004
Number of extensions: 56260
Number of successful extensions: 270
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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