BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L10
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 90 2e-20
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 56 3e-10
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 43 4e-06
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 40 4e-05
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 36 5e-04
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 33 0.004
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 28 0.12
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 90.2 bits (214), Expect = 2e-20
Identities = 40/115 (34%), Positives = 58/115 (50%)
Frame = -1
Query: 437 GTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERP 258
G Y C C ++ K+ L H +H ER + C +C + L RH H ERP
Sbjct: 116 GEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
Query: 257 YVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKR 93
+ C+VC+K F + L +H H+G K +C CGKGF L+ HTR+H ++
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEK 230
Score = 79.8 bits (188), Expect = 3e-17
Identities = 36/111 (32%), Positives = 52/111 (46%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCS 246
Y C C+ A+ +L +H+ +H ER C +C + L H H E+PYVC
Sbjct: 148 YKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCK 207
Query: 245 VCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKR 93
C KGF + L +H H+G K C CGK F L+ H +H ++
Sbjct: 208 ACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEK 258
Score = 76.6 bits (180), Expect = 3e-16
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVH--KIERRFICGICGAGLKRKEHLERHKLGHNPERPYV 252
Y C CQ A+ +K+ + HL H + E + C ICG L RH H E+PY
Sbjct: 62 YQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQ 121
Query: 251 CSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKR 93
C C+K F +E+L++H +H+ + C C + F L +H R H +R
Sbjct: 122 CEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGER 174
Score = 76.6 bits (180), Expect = 3e-16
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = -1
Query: 419 CPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVC 240
C C + + +L H+ H E+ ++C CG G + L+ H H E+PY C +C
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDIC 237
Query: 239 TKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSH-ESKRAREQADAATA 63
K F L LH V H G K C C + F K + H ++H +S D+
Sbjct: 238 GKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPRDSPIE 297
Query: 62 EKPQPANNNTSSIPVKKKKK 3
+ + + N+ S+ K+ K
Sbjct: 298 PEIEISQNSVSTGSDKENHK 317
Score = 75.4 bits (177), Expect = 6e-16
Identities = 35/116 (30%), Positives = 52/116 (44%)
Frame = -1
Query: 440 DGTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPER 261
+G Y C C + L +H H E+ + C C KE+L H+ H ER
Sbjct: 87 EGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKER 146
Query: 260 PYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKR 93
PY C VC + F+ L+ H +H+G + C C K F + L H R+H ++
Sbjct: 147 PYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEK 202
Score = 56.8 bits (131), Expect = 2e-10
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = -1
Query: 467 GQVVIATAAD-GTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLE 291
GQ+VI G Y C C + +L+ H H E+ + C ICG L+
Sbjct: 189 GQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLK 248
Query: 290 RHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHS 186
H++ H E+ Y C++C + F ++ + LH HS
Sbjct: 249 LHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHS 283
Score = 53.6 bits (123), Expect = 2e-09
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = -1
Query: 350 ERRFICGICGAGLKRKEHLERHKLGHNPER--PYVCSVCTKGFKRREHLNLHAVLHSGVK 177
E+ + C +C +K + H H E PY C++C K F L H H+G K
Sbjct: 59 EKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEK 118
Query: 176 TEICGECGKGFYRKDHLRKHTRSHESKR 93
C C K F K++L H R H +R
Sbjct: 119 PYQCEYCSKSFSVKENLSVHRRIHTKER 146
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 56.4 bits (130), Expect = 3e-10
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = -1
Query: 275 HNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESK 96
H E+P+ C C K F R HL H LH+G K C C + F + +LR+H R H +
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGE 63
Query: 95 R 93
R
Sbjct: 64 R 64
Score = 51.2 bits (117), Expect = 1e-08
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 419 CPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVC 240
CPEC + L+ H+ +H E+ + C C + +L RH H ERPY C +C
Sbjct: 12 CPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
Score = 48.4 bits (110), Expect = 8e-08
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -1
Query: 359 HKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGV 180
H E+ F C C R HL+ H H E+PY CS C + F + +L H +H+G
Sbjct: 4 HTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGE 63
Query: 179 KTEICGEC 156
+ C C
Sbjct: 64 RPYACELC 71
Score = 33.5 bits (73), Expect = 0.002
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 437 GTPIYCCPECQMAYREKDELEQHLSVHKIERRFICGICGA 318
G Y C C + + L +HL VH ER + C +C A
Sbjct: 34 GEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELCAA 73
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 42.7 bits (96), Expect = 4e-06
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -1
Query: 425 YCCPECQMAYREKDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCS 246
+ C C+ Y L+ H+ H + + C +CG R L+ H H E+P+ C
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHTLPCK--CHLCGKAFSRPWLLQGHIRTHTGEKPFSCQ 74
Query: 245 VCTKGF 228
C + F
Sbjct: 75 HCNRAF 80
Score = 31.9 bits (69), Expect = 0.007
Identities = 20/69 (28%), Positives = 26/69 (37%)
Frame = -1
Query: 350 ERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTE 171
++ F C C L+ H H P C +C K F R L H H+G K
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPF 71
Query: 170 ICGECGKGF 144
C C + F
Sbjct: 72 SCQHCNRAF 80
Score = 29.1 bits (62), Expect = 0.052
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 266 ERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKR 93
++ + C C K + L +H H+ + + C CGK F R L+ H R+H ++
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT-LPCK-CHLCGKAFSRPWLLQGHIRTHTGEK 69
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = -1
Query: 305 KEHLERHKLGHNPERPYVCSVCTKGFKRREHLNLHAVLHSGVKTEICGECGKGFYRKDHL 126
K HLE H H +P+ C C+ + LN H HS V C C L
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60
Query: 125 RKHTRSH 105
+ H R +
Sbjct: 61 KLHLRKY 67
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/63 (33%), Positives = 24/63 (38%)
Frame = -1
Query: 389 KDELEQHLSVHKIERRFICGICGAGLKRKEHLERHKLGHNPERPYVCSVCTKGFKRREHL 210
K LE HL H + F C C K L H H+ Y C+ CT K L
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60
Query: 209 NLH 201
LH
Sbjct: 61 KLH 63
Score = 29.9 bits (64), Expect = 0.030
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -1
Query: 221 REHLNLHAVLHSGVKTEICGECGKGFYRKDHLRKHTRSHESKRAREQADAATAEK 57
+ HL H H G K C +C K L H +SH + A+ A K
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATK 55
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 35.9 bits (79), Expect = 5e-04
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 341 FICGICGAGLKRKEHLERHKLGHN--PERPYVCSVCTKGFKRREHLNLHAVLH 189
+ C +CG L K L+RHK + P VC++C K F+ LN H ++
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIY 424
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 32.7 bits (71), Expect = 0.004
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 350 ERRFICGICGAGLKRKEHLERHKLGHNPER--PYVCSVCTKGFKRREHLNLH 201
++ F C +CG L K L+RH + ER Y C +C + + R L H
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTH 54
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 188 SGVKTEICGECGKGFYRKDHLRKHTRSHESKRARE 84
S K C CGK K L++H ++R E
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAERQEE 35
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 27.9 bits (59), Expect = 0.12
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 553 RMASATASTVLSCSGGTSTSIICFFASVCFSLXNCC 660
R + ++S S S +C + + CF+L +CC
Sbjct: 715 RTSGPRGVAIVSASTARSEQFLCRYEAHCFALCHCC 750
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,215
Number of Sequences: 438
Number of extensions: 4320
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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