Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L08
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 173 2e-43
03_01_0547 + 4093196-4093657,4094267-4095148 173 2e-43
03_01_0544 + 4082528-4082989,4083585-4084466 173 2e-43
03_01_0543 + 4076981-4077442,4078145-4079026 173 2e-43
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 51 8e-07
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 51 8e-07
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 49 3e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 49 3e-06
08_02_0363 + 16238710-16240224,16240537-16240545 30 1.7
11_06_0383 + 22965599-22966090 29 3.9
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903 29 5.2
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 29 5.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 81/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNV+VK G P AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDM 417
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 418 RQTVAVGVIKNVE 430
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 81/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNV+VK G P AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDM 417
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 418 RQTVAVGVIKNVE 430
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 81/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNV+VK G P AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDM 417
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 418 RQTVAVGVIKNVE 430
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 173 bits (420), Expect = 2e-43
Identities = 81/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNV+VK G P AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDM 417
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 418 RQTVAVGVIKNVE 430
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = -3
Query: 640 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 461
+V+VL+ I GY H A + +I +D+ GK ++ P+ +KS A+V
Sbjct: 577 RVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVV 635
Query: 460 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 353
+ P+CV+ F + LGR +R T+AVGV+
Sbjct: 636 QVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/96 (31%), Positives = 49/96 (51%)
Frame = -3
Query: 640 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIV 461
+V+VL+ I GY H A + +I +D+ GK ++ P+ +KS A+V
Sbjct: 577 RVLVLDVTIPILIGYQVEFHIHHVKEAARVTKIVALLDK-AGKPSKTAPRFLKSKQNAVV 635
Query: 460 NLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 353
+ P+CV+ F + LGR +R T+AVGV+
Sbjct: 636 QVTLDAPVCVQEFSKCRALGRAFLRSSGSTIAVGVV 671
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/71 (28%), Positives = 40/71 (56%)
Frame = -3
Query: 565 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 386
++ +I ++++TGK+++ P+ + S A++ + K +CVE F LGR +R
Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLR 636
Query: 385 DMRQTVAVGVI 353
T+AVG++
Sbjct: 637 SQGNTIAVGIV 647
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = -3
Query: 670 PT*GAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVN 497
P +F AQ+ +L + GY VL H+ C+ ++ E++D + K +
Sbjct: 312 PVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPK 371
Query: 496 PKS-------IKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 386
K +K+G + + + +C+E+F +FP LGRF +R
Sbjct: 372 KKKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLR 415
>08_02_0363 + 16238710-16240224,16240537-16240545
Length = 507
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/81 (24%), Positives = 33/81 (40%)
Frame = -1
Query: 699 GYVAGDSXNNPPKVLQILQLKSLCLTILVKSQTVTHQFWIATLPTLPANXXXXXXXXXXX 520
GY G N P+ + +L L + L K + +TH +AT +P
Sbjct: 162 GYAIGQRWNVTPEPIHLLHLLHILLIGCQKPRALTHTHQVATGAAVPTE--PHAARSRIE 219
Query: 519 XXXXXKSTQNPSSLEMQPLST 457
+ QN +++EM P+ T
Sbjct: 220 ASSANITRQNETAIEMVPVIT 240
>11_06_0383 + 22965599-22966090
Length = 163
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 229 KYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLXVDSLG*LRQQLSAS 381
+++ C +C V S +PLV F A V++P ++L + S L + L AS
Sbjct: 54 RHKRC--SCVVPSDHSLVPLVVFIAVRVSMPSSSALVIVSHSGLLRLLRAS 102
>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
Length = 1135
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 132 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 212
N M PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 628 LNHPGQISNGYTPVLDCHTAHIACKFAEIKE-KVDRRTGKSTEVNPKSI 485
L+ P +ISNG TPV D ++ C+ K D + + +EV+ S+
Sbjct: 271 LHRPRRISNGTTPVFDDNSGSHLCQDVSSKSFSADDQCLQDSEVDKDSV 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,746,378
Number of Sequences: 37544
Number of extensions: 389138
Number of successful extensions: 948
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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