Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L08
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 190 7e-49
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 190 7e-49
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 190 7e-49
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 29 2.6
L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical p... 29 3.5
L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 3.5
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 6.1
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 6.1
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 6.1
AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn pro... 28 8.1
AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance t... 28 8.1
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 190 bits (464), Expect = 7e-49
Identities = 93/133 (69%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNVSVK G C + P A F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 276 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 335
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 336 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 395
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 396 RQTVAVGVIKSVE 408
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 190 bits (464), Expect = 7e-49
Identities = 93/133 (69%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNVSVK G C + P A F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 430 RQTVAVGVIKSVE 442
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 190 bits (464), Expect = 7e-49
Identities = 93/133 (69%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Frame = -3
Query: 736 FNVKNVSVKXCV-GLCCW*LXKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 560
FNVKNVSVK G C + P A F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369
Query: 559 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 380
CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429
Query: 379 RQTVAVGVIQGCQ 341
RQTVAVGVI+ +
Sbjct: 430 RQTVAVGVIKSVE 442
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = -3
Query: 649 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 470
F A+V+VL H I++GY+ VL +A + +D++TG+ K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEK 488
Query: 469 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 353
I+ L +P +E F+E+P LGRF +RD +T+A+G +
Sbjct: 489 CIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKV 527
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/100 (22%), Positives = 44/100 (44%)
Frame = -3
Query: 649 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 470
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546
Query: 469 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIQ 350
A+V + + +E+F LGR R T+A G+++
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVE 586
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/100 (22%), Positives = 44/100 (44%)
Frame = -3
Query: 649 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 470
F +++ I G L H+ + C F + +++ G+ + P+ I G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564
Query: 469 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIQ 350
A+V + + +E+F LGR R T+A G+++
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVE 604
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 314 PCHHQPPXKLTALDDSDSNCLPHVTDSKTTEGW 412
P H PP K+TA D +D P +++ K +G+
Sbjct: 231 PVMHSPPRKMTAKDQNDWKIPPCISNWKNPKGF 263
>L15313-10|AAP68920.1| 355|Caenorhabditis elegans Hypothetical
protein ZK353.1a protein.
Length = 355
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 353 DDSDSNCLPHVTDSKTTEGWE 415
D++ +N LPH+++ + TEG+E
Sbjct: 42 DETSTNFLPHISEREVTEGYE 62
>L15313-9|AAP68921.1| 357|Caenorhabditis elegans Hypothetical
protein ZK353.1b protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 353 DDSDSNCLPHVTDSKTTEGWE 415
D++ +N LPH+++ + TEG+E
Sbjct: 44 DETSTNFLPHISEREVTEGYE 64
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 201 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 94
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 586 LDCHTAHIACKFAEIKEKVDRRTGKSTE 503
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 586 LDCHTAHIACKFAEIKEKVDRRTGKSTE 503
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 586 LDCHTAHIACKFAEIKEKVDRRTGKSTE 503
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AF288812-1|AAG10199.1| 566|Caenorhabditis elegans synembryn
protein.
Length = 566
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 470 CISRLDGFWVDFSRFTSTTVNFFFDFCKFAGNVGSVAIQN 589
C +R + D +R T FF FC F G+V ++ +N
Sbjct: 211 CTNRSENSTQDINRATEALKTFFNVFCHFHGDVKAIDHKN 250
>AC084158-34|AAK68564.1| 566|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 8, isoform a
protein.
Length = 566
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 470 CISRLDGFWVDFSRFTSTTVNFFFDFCKFAGNVGSVAIQN 589
C +R + D +R T FF FC F G+V ++ +N
Sbjct: 211 CTNRSENSTQDINRATEALKTFFNVFCHFHGDVKAIDHKN 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,919,135
Number of Sequences: 27780
Number of extensions: 336120
Number of successful extensions: 830
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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