Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_L02
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 335 2e-92
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 335 2e-92
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 335 2e-92
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 335 2e-92
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 335 2e-92
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 335 2e-92
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 291 3e-79
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 291 3e-79
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 33 0.16
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 150 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 206
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 207 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 266
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 267 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 90 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 149
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 150 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 206
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 207 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 266
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 267 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 335 bits (823), Expect = 2e-92
Identities = 155/212 (73%), Positives = 179/212 (84%)
Frame = -3
Query: 734 GTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKG 555
GTIE KV WAREHLEK + VD+VFAQDEMID I VT+G G+KGVTSRWHTKKLPRKTHKG
Sbjct: 188 GTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 247
Query: 554 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 375
LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+
Sbjct: 248 LRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEF 304
Query: 374 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 195
DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A EKINLK+
Sbjct: 305 DLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKW 364
Query: 194 IDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 99
IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 365 IDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 291 bits (715), Expect = 3e-79
Identities = 135/190 (71%), Positives = 158/190 (83%)
Frame = -3
Query: 668 VFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 489
V A +MID I VT+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 488 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 309
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 308 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 129
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 128 GTLKKDRIRE 99
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 291 bits (715), Expect = 3e-79
Identities = 135/190 (71%), Positives = 158/190 (83%)
Frame = -3
Query: 668 VFAQDEMIDCIXVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 489
V A +MID I VT+G G+KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 488 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNND 309
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPMGGFP YG VN D
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 308 FVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFM 129
++M++G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFM
Sbjct: 279 YIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFM 338
Query: 128 GTLKKDRIRE 99
G LK+D + E
Sbjct: 339 GKLKRDFLAE 348
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = -3
Query: 680 PVDSV-FAQDEMIDCIXVTKGKGYKGVTSRWHTKKLP-RKTHKGLRKVACIGAWHPSRVS 507
P+D+ F + + T G++G RW + P R+T K R++ +G+ +R+
Sbjct: 212 PLDARHFGVGQYVTATGKTIDWGFQGGMHRWGMRGQPTRRTTKSHRRIGSVGSVGDARIW 271
Query: 506 FTVARAGQKGYHHRTEMNKKIYRI 435
G GY RT +I RI
Sbjct: 272 PGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,869,713
Number of Sequences: 27780
Number of extensions: 396820
Number of successful extensions: 1043
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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