Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_K23
         (916 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.96 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   1.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   5.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 356 GTRVIRREWTETKDSSKVTDR*RSPDEIPERRSQSKERRG*VXLPVAF--PSRVYTS*SS 529
           G  +++  W E ++    + +  +  E P+  ++S E+R     P AF   + +Y + + 
Sbjct: 586 GKGIMKTYWLEKREHRSSSTKGITIQEPPQWHTRSTEKRVSAGTPAAFNISTTIYENQNC 645

Query: 530 LIV*L*RSGKSEGTP*AASAGTMREQ 607
           L     R G   G+P  A +  + E+
Sbjct: 646 LDASSSRRGSKIGSPTPAESTFIPEE 671


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 455 GSAAQVFHQATFIYLSLYLNPSF 387
           GSA  VFHQ   +Y   YL PS+
Sbjct: 396 GSATPVFHQEMALY---YLKPSY 415


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 435  SSGDLHLSVTLLESFVSVHSLLITRVPQPPPS 340
            S+  LH + TLL SF+     +      PPP+
Sbjct: 1726 SAAGLHPNNTLLHSFMYHEHAMTEGCASPPPA 1757


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 435  SSGDLHLSVTLLESFVSVHSLLITRVPQPPPS 340
            S+  LH + TLL SF+     +      PPP+
Sbjct: 1722 SAAGLHPNNTLLHSFMYHEHAMTEGCASPPPA 1753


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 167 QRQKPEHSWVQSSAWDNLAN 108
           +RQ  E+ W+ S+ +  +AN
Sbjct: 366 ERQNNEYIWIVSNKYQKIAN 385


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,494
Number of Sequences: 438
Number of extensions: 4230
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)