Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_K16
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.39
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 32 0.52
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.68
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 31 0.90
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.8
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 6.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 6.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 6.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 28 8.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.4
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.39
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +3
Query: 513 GGXLXXPXGXAPXXPRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPP 692
GG P P P+ P P PP P P C P + PP PP
Sbjct: 20 GGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.52
Identities = 47/197 (23%), Positives = 54/197 (27%), Gaps = 12/197 (6%)
Frame = +3
Query: 387 PRXGXPP-PPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPXPGGXLXXPXGXAPXXPRP 563
P PP PP AP P P + C P + P AP P P
Sbjct: 34 PVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCAN--------PPCIVVEPMPVAPPAPAP 85
Query: 564 VXXPXPXXXPP---XXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXA--PXLX 728
P P PP P P P+ P A PP P P A P
Sbjct: 86 AYNPYPCATPPCPLPYIPEPVAPVPAPAPVYEPYACAAPPCPPPTPVYEPYACAAPPCPA 145
Query: 729 XXPPXPLXXSXXXXXXXQXSSXXXXPXXXXXPT-----AHFXXPPLXXPXXSS-XPXKLP 890
P P+ Q P PT + PP P + P
Sbjct: 146 PVAPQPVIQHVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVPPCPAPAATPVYAQPAP 205
Query: 891 XPXPXLSPXXPPSDXPP 941
P P +P P PP
Sbjct: 206 RPMPVYAP-APACAQPP 221
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.68
Identities = 32/125 (25%), Positives = 36/125 (28%)
Frame = +3
Query: 384 RPRXGXPPPPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPXPGGXLXXPXGXAPXXPRP 563
+P+ PPPP AP P P + AP P P P P
Sbjct: 44 QPQQTAPPPPP-APYPQQAVPAPAP---PPAPYPQHAVPAPAP------PLASYPQNAVP 93
Query: 564 VXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXXPPX 743
V P P P P P + P PP PP P P PP
Sbjct: 94 VPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP-PPPHYPPPPPHYPPPP 152
Query: 744 PLXXS 758
P S
Sbjct: 153 PAPHS 157
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/65 (27%), Positives = 23/65 (35%)
Frame = +3
Query: 555 PRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXX 734
P P+ P P PP P L P + P + P PP P P +
Sbjct: 155 PTPIPTPVPILEPPPPPPPVPPLSPLYKVLEIPATPSPIFVAPLPP--PPAYTTPDV--- 209
Query: 735 PPXPL 749
PP P+
Sbjct: 210 PPEPM 214
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/62 (25%), Positives = 20/62 (32%)
Frame = +3
Query: 555 PRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXX 734
P+P+ PP P P P+ F + PP PP AP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Query: 735 PP 740
PP
Sbjct: 814 PP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/62 (25%), Positives = 20/62 (32%)
Frame = +3
Query: 555 PRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXX 734
P+P+ PP P P P+ F + PP PP AP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
Query: 735 PP 740
PP
Sbjct: 814 PP 815
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/123 (25%), Positives = 34/123 (27%)
Frame = +3
Query: 561 PVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXXPP 740
PV P P P P P P P + PP PP P + PP
Sbjct: 262 PVPPPPPSVTP---MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
Query: 741 XPLXXSXXXXXXXQXSSXXXXPXXXXXPTAHFXXPPLXXPXXSSXPXKLPXPXPXLSPXX 920
P P P PP P S+ P P P P P
Sbjct: 319 PP--PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP--SAGPGMYPPPPPS-RPPA 373
Query: 921 PPS 929
PPS
Sbjct: 374 PPS 376
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 31/123 (25%), Positives = 34/123 (27%)
Frame = +3
Query: 561 PVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPPRXXPXXXAPXLXXXPP 740
PV P P P P P P P + PP PP P + PP
Sbjct: 272 PVPPPPPSVTP---MPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
Query: 741 XPLXXSXXXXXXXQXSSXXXXPXXXXXPTAHFXXPPLXXPXXSSXPXKLPXPXPXLSPXX 920
P P P PP P S+ P P P P P
Sbjct: 329 PP--PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP--SAGPGMYPPPPPS-RPPA 383
Query: 921 PPS 929
PPS
Sbjct: 384 PPS 386
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +3
Query: 387 PRXGXPPPPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPXPGGXLXXPXGXAPXXPRPV 566
P G PPPP P P P + G + P G P G P P
Sbjct: 232 PPAGSPPPP---PPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Query: 567 XXPXPXXXPPXXXPXPXXLXPS 632
P P P P P P+
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPT 309
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +3
Query: 387 PRXGXPPPPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPXPGGXLXXPXGXAPXXPRPV 566
P G PPPP P P P + G + P G P G P P
Sbjct: 253 PPAGSPPPP---PPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Query: 567 XXPXPXXXPPXXXPXPXXLXPS 632
P P P P P P+
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPT 330
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = +3
Query: 387 PRXGXPPPPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPXPGGXLXXPXGXAPXXPRPV 566
P G PPPP P P P + G + P G P G P P
Sbjct: 238 PPAGSPPPP---PPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Query: 567 XXPXPXXXPPXXXPXPXXLXPS 632
P P P P P P+
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPT 315
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 843 PPLXXPXXSSXPXKLPX-PXPXLSPXXPPSDXPP 941
PP+ P P + P P P P PPS PP
Sbjct: 160 PPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +3
Query: 504 PXPGGXLXXPXGXAPXXPRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPP 683
P P G L G P P P P PP P P P P PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPP 785
Query: 684 QPPRXXPXXXAPXLXXXP 737
PP P AP P
Sbjct: 786 PPP--PPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +3
Query: 504 PXPGGXLXXPXGXAPXXPRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPP 683
P P G L G P P P P PP P P P P PP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPP 785
Query: 684 QPPRXXPXXXAPXLXXXP 737
PP P AP P
Sbjct: 786 PPP--PPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.8
Identities = 23/78 (29%), Positives = 23/78 (29%)
Frame = +3
Query: 504 PXPGGXLXXPXGXAPXXPRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPP 683
P P G L G P P P P PP P P P P PP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPP 368
Query: 684 QPPRXXPXXXAPXLXXXP 737
PP P AP P
Sbjct: 369 PPP--PPGMFAPMAPVIP 384
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/112 (23%), Positives = 31/112 (27%), Gaps = 5/112 (4%)
Frame = +3
Query: 372 PRXTRPRXGXPPPPXXAPXPLARXPXSXXGLDXXFCXXXXTLXAPX-----PGGXLXXPX 536
PR + G PP P R P + P P P
Sbjct: 297 PRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPASQPPVREPETPDSGYPSPA 356
Query: 537 GXAPXXPRPVXXPXPXXXPPXXXPXPXXLXPSFXCXXFPXXXAXXLXPPQPP 692
P P P P P P P P PS+ +P A + PP P
Sbjct: 357 PQEPAHPSP-SYPSPSYPSPSY-PSPSYPSPSYPSPSYPAEPAYSVPPPAKP 406
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +3
Query: 687 PPRXXPXXXAPXLXXXPPXPLXXSXXXXXXXQXSSXXXXPXXXXXPTAHFXXPPLXXPXX 866
PP P P PP PL P P F PP P
Sbjct: 84 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP-FSVPPSVPPPT 142
Query: 867 SSXPXKLPXPXPXLSPXXPP 926
SS + P P S PP
Sbjct: 143 SSAAAPIVPPPPVQSTAQPP 162
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +3
Query: 687 PPRXXPXXXAPXLXXXPPXPLXXSXXXXXXXQXSSXXXXPXXXXXPTAHFXXPPLXXPXX 866
PP P P PP PL P P F PP P
Sbjct: 107 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP-FSVPPSVPPPT 165
Query: 867 SSXPXKLPXPXPXLSPXXPP 926
SS + P P S PP
Sbjct: 166 SSAAAPIVPPPPVQSTAQPP 185
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +3
Query: 687 PPRXXPXXXAPXLXXXPPXPLXXSXXXXXXXQXSSXXXXPXXXXXPTAHFXXPPLXXPXX 866
PP P P PP PL P P F PP P
Sbjct: 357 PPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP-FSVPPSVPPPT 415
Query: 867 SSXPXKLPXPXPXLSPXXPP 926
SS + P P S PP
Sbjct: 416 SSAAAPIVPPPPVQSTAQPP 435
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.4
Identities = 36/157 (22%), Positives = 41/157 (26%), Gaps = 10/157 (6%)
Frame = +3
Query: 501 APXPGGXLXXPXGXAPXXPRPVXX---PXPXXXP-----PXXXPXPXXLXPSFXCXXF-- 650
+P P P P P PV P P P P P P + PS
Sbjct: 106 SPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVE 165
Query: 651 PXXXAXXLXPPQPPRXXPXXXAPXLXXXPPXPLXXSXXXXXXXQXSSXXXXPXXXXXPTA 830
P PP P P P P+ S S P P+
Sbjct: 166 PSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSE 225
Query: 831 HFXXPPLXXPXXSSXPXKLPXPXPXLSPXXPPSDXPP 941
PP P S P P PP+ PP
Sbjct: 226 ----PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPP 258
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -3
Query: 745 GXGGXX*XXGAXXXGXXRGGXGGXXXXAXXXGKX*QXKXGXRXXGX-GXXXGGXXXGXGX 569
G GG G G R G GG G + G R G G GG G
Sbjct: 24 GWGGGPGRWGGW--GGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGN 81
Query: 568 XTGRGXWGAXPXG 530
GRG WG G
Sbjct: 82 GGGRGDWGGNGGG 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,831,231
Number of Sequences: 27780
Number of extensions: 157766
Number of successful extensions: 750
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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