Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_K09
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.04 |rpl2502|rpl25b, rpl23a-2|60S ribosomal protein L25|S... 154 2e-38
SPBC106.18 |rpl2501|rpl25a|60S ribosomal protein L25|Schizosacch... 145 7e-36
SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces p... 26 6.9
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 6.9
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 6.9
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 25 9.1
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 25 9.1
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 25 9.1
>SPBC4F6.04 |rpl2502|rpl25b, rpl23a-2|60S ribosomal protein
L25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 141
Score = 154 bits (373), Expect = 2e-38
Identities = 76/133 (57%), Positives = 92/133 (69%)
Frame = -2
Query: 501 AQRKVVKGEHGKRVRKIXNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTX 322
AQ+ V KG H K RK+ FRRPKT E R PKY RK +P +R+D Y II P
Sbjct: 9 AQKTVQKGIHNKVARKVRTSTTFRRPKTLELARKPKYARKSVPHASRLDEYKIIVNPINS 68
Query: 321 EAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLARD 142
E+AMKKIED+NTLVF VH ANK IK AVKKLY ++ K+NT IRP+G KKA+V+L+ D
Sbjct: 69 ESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSAD 128
Query: 141 YDALDVAXKIGII 103
DALDVA +IG +
Sbjct: 129 ADALDVANRIGFL 141
>SPBC106.18 |rpl2501|rpl25a|60S ribosomal protein
L25|Schizosaccharomyces pombe|chr 2|||Manual
Length = 141
Score = 145 bits (351), Expect = 7e-36
Identities = 72/133 (54%), Positives = 89/133 (66%)
Frame = -2
Query: 501 AQRKVVKGEHGKRVRKIXNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTX 322
AQ+ V KG H K +K+ FRRPKT + R PKY RK + R+D Y II P
Sbjct: 9 AQKTVQKGIHNKVAKKVRTSTTFRRPKTLQLSRKPKYARKSVAHAPRLDEYKIIVNPINS 68
Query: 321 EAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLARD 142
E+AMKKIED+NTLVF VH ANK IK AV+KLY + K+NT IRP+G KKA+V+L+ D
Sbjct: 69 ESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAFVKLSAD 128
Query: 141 YDALDVAXKIGII 103
DALDVA +IG +
Sbjct: 129 ADALDVANRIGFL 141
>SPAC22H12.05c |||fasciclin domain protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 728
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 300 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXI 187
ED N LV I SA + ++ + + N+G V+ +
Sbjct: 372 EDTNALVRIATGSAGEMYVNVETRSIQSENIGNVSLYV 409
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 79 SXKIWNSLYDADFVGNVQCVIISSESYVRFLLTIRPDXSVDF 204
S +W +++ A FV + + +S +RFL ++P DF
Sbjct: 596 SAALWITVFIAKFVESYYFLTLSVRDPIRFLQRMKPYDCYDF 637
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +1
Query: 355 IHAISLRQXLPWVLRVPR--RFKRLGSAEMHXVANFPYSLPMFTFYNLPLSLKCFXNRFH 528
+ A + P R P+ RF+ L S++ + + PY+ P F S + + H
Sbjct: 196 LRASPVSSRTPSPTRFPKHARFQTLNSSDSASIYSSPYTSPTLEFSKKDASARSDILKMH 255
Query: 529 YFFLSLNPSL 558
S PSL
Sbjct: 256 RRTKSATPSL 265
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 25.4 bits (53), Expect = 9.1
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Frame = -3
Query: 374 LREIAWMPTTSLNSLSRXKQQ*RRLKITTPWXLLFTQVQTSTI------SRLQSRNXMI* 213
L IA+ T SL + K+ R + T PW +L +Q I +RL S+N +
Sbjct: 337 LESIAFESTDSLTVV--WKESTRTVFETVPWRILSSQATNGLIELVRSKTRLTSKNKTVS 394
Query: 212 MLV---KSTLSSGLMVRRKRTYDSL 147
+ +T+SSG+M + R + +
Sbjct: 395 NVYDESNATISSGVMQKDLRKTEEI 419
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 619 SQNCQTQASSFQIEDCTEAXKDWD*G 542
S+NCQ + +++C EA D D G
Sbjct: 479 SENCQKLSKQIPLDECNEALFDDDNG 504
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 127 VQCVIISSESYVRFLLTI--RPDXSVDFTNIYIIXFLDCSLDMV 252
V I S +S+ FL+ D SVD ++ I+ +CS D++
Sbjct: 45 VVTTITSYQSFANFLVDYCKNQDQSVDIKSLCILGTFNCSADIL 88
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,180,984
Number of Sequences: 5004
Number of extensions: 34412
Number of successful extensions: 96
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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