Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_K09
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75541-4|CAA99858.1|  146|Caenorhabditis elegans Hypothetical pr...   155   3e-38
U40948-2|AAA81728.1|  147|Caenorhabditis elegans Ribosomal prote...   154   8e-38
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81132-11|CAB03426.2|  302|Caenorhabditis elegans Hypothetical p...    29   3.7  

>Z75541-4|CAA99858.1|  146|Caenorhabditis elegans Hypothetical
           protein F52B5.6 protein.
          Length = 146

 Score =  155 bits (376), Expect = 3e-38
 Identities = 76/133 (57%), Positives = 93/133 (69%)
 Frame = -2

Query: 501 AQRKVVKGEHGKRVRKIXNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTX 322
           A++ VVKG      + +   VHFRRPKT    R P+Y RK  P R+++D++ +IK P T 
Sbjct: 14  AKKAVVKGSKTNVRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDSFAVIKAPHTT 73

Query: 321 EAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLARD 142
           E++MKKIED+NTLVFIV   ANKHHIK AV  LY++   KVNT I P  +KKAYVRLA D
Sbjct: 74  ESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASD 133

Query: 141 YDALDVAXKIGII 103
           YDALDVA KIG I
Sbjct: 134 YDALDVANKIGFI 146


>U40948-2|AAA81728.1|  147|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 25.1 protein.
          Length = 147

 Score =  154 bits (373), Expect = 8e-38
 Identities = 75/133 (56%), Positives = 95/133 (71%)
 Frame = -2

Query: 501 AQRKVVKGEHGKRVRKIXNXVHFRRPKTFEPPRHPKYPRKXLPKRNRMDAYNIIKFPXTX 322
           A++KVVKG+     R++   VHFRRP T +  R  ++PRK  PK ++MD + II+ P T 
Sbjct: 15  AKKKVVKGKRTTHRRQVRTSVHFRRPVTLKTARQARFPRKSAPKTSKMDHFRIIQHPLTT 74

Query: 321 EAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVGKVNTXIRPDGKKKAYVRLARD 142
           E+AMKKIE++NTLVFIV   ANK+ IK AV KLY++   KVNT I P  +KKAYVRL  D
Sbjct: 75  ESAMKKIEEHNTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVRLTAD 134

Query: 141 YDALDVAXKIGII 103
           YDALDVA KIG+I
Sbjct: 135 YDALDVANKIGVI 147


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 103 YDADFVGNVQCVI-ISSESYVRFLLTIRPDXSVDFTNIYI 219
           YD   +   Q  + I+ ++YV+   ++RPD  VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 103 YDADFVGNVQCVI-ISSESYVRFLLTIRPDXSVDFTNIYI 219
           YD   +   Q  + I+ ++YV+   ++RPD  VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 103 YDADFVGNVQCVI-ISSESYVRFLLTIRPDXSVDFTNIYI 219
           YD   +   Q  + I+ ++YV+   ++RPD  VDF N+ +
Sbjct: 696 YDMGHMAGRQAQLAINGDNYVKVFRSMRPDLKVDFKNLRV 735


>Z81132-11|CAB03426.2|  302|Caenorhabditis elegans Hypothetical
           protein T26E4.15 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
 Frame = +1

Query: 202 FTNIYIIXFLDCSLDMVLVCTCVNNKXQGVVIFNLLHCCFXRXREFNDVVGI---HAISL 372
           ++ I+I+ F   +L MVLV T  +NK + +    +  CCF     F DV+         L
Sbjct: 12  YSTIFIVGFTG-NLFMVLV-TLHSNKLRSICNILICVCCFCDLLLFTDVIAFVVSMLTPL 69

Query: 373 RQXLPWVLRVPRRFKRLGS 429
            Q L + + +P  F    S
Sbjct: 70  TQELCFYISIPADFGAFAS 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,156,549
Number of Sequences: 27780
Number of extensions: 196492
Number of successful extensions: 581
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)