Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_K08
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 33 0.23
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 33 0.23
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 33 0.30
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 30 1.6
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.8
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC024810-16|AAO21412.2| 684|Caenorhabditis elegans Cdt (s. pomb... 28 6.4
AC024810-15|AAF60769.1| 741|Caenorhabditis elegans Cdt (s. pomb... 28 6.4
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 8.5
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 8.5
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 28 8.5
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 28 8.5
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 28 8.5
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 264 AMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAP 437
A A A G +R+ K P+E P+E TV+GA P T + +Q P
Sbjct: 1413 AKAANGSAQGSSRSTPKPKEEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEP 1470
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 264 AMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAP 437
A A A G +R+ K P+E P+E TV+GA P T + +Q P
Sbjct: 1413 AKAANGSAQGSSRSTPKPKEEPKEEPMEKEDATETVNGATSEPATDAESEQNAPVDEP 1470
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 78 RTPAPPERKKGRR--EGPRSFTSPNFSQETTPXKKAREALAPXERLPTKPHRAPPHR 242
++PAP R+ + + PR SP+ S+ +P ++ A AP R + R+P R
Sbjct: 447 KSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRR 503
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 148 KLGEVKDLGPSLLPFFLSGGAGVRHN 71
+LG KD G LLPFFL G A R++
Sbjct: 56 RLGIPKDTGTRLLPFFLDGVAKTRYD 81
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1
Query: 148 KLGEVKDLGPSLLPFFLSGGAGVRHN 71
+LG KD G LLPFFL G A R++
Sbjct: 444 RLGIPKDTGTRLLPFFLDGVAKTRYD 469
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 378 AQEPPCTASPPDQRPSARAPPXPGTXXXXXXXXXXXXHAPSTPPS 512
A PP T +PP P+ +APP P T AP T P+
Sbjct: 190 APPPPTTKAPPP--PTTKAPPPPTTNKEVTTVAPVPKPAPVTAPA 232
>Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical
protein E04D5.3 protein.
Length = 507
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +3
Query: 297 TRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPPXPGTXXXXXXXX 476
T T + E+ R + V+ ++ P T P PS+ APP PG
Sbjct: 294 TETAEPYPYDSHESGYPTRPANYPVASSRYPIPTTQAPASYPSSPAPPPPGADIDNGYPE 353
Query: 477 XXXXHAPSTPPSA 515
+ TP +A
Sbjct: 354 PQPIYIAETPENA 366
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 291 GGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPP 440
GG R + RE P PR T S P T PP P +PP
Sbjct: 388 GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 437
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 291 GGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPP 440
GG R + RE P PR T S P T PP P +PP
Sbjct: 409 GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 458
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 291 GGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPP 440
GG R + RE P PR T S P T PP P +PP
Sbjct: 394 GGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 443
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +3
Query: 90 PPERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLPTKPHRAPPHRLHETYGTAM 269
PP E PR+ ++ N+S +T RE PT+ + M
Sbjct: 42 PPPESSADEEEPRASSNNNYSSTSTVAAPTRE--------PTRVSTLKREEKEKKQKERM 93
Query: 270 RAESLALGGTRT-DVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQR 419
E L R + + + V P LG T S +EPP T + D+R
Sbjct: 94 ERERRELEEKRVQEDEMKKEEHNHTVHPSLGERT-SYVEEPPSTTTTLDRR 143
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/111 (25%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +3
Query: 90 PPERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLPTKPHRAPPHRLHETYGTAM 269
PP E PR+ ++ N+S +T RE PT+ + M
Sbjct: 42 PPPESSADEEEPRASSNNNYSSTSTVAAPTRE--------PTRVSTLKREEKEKKQKERM 93
Query: 270 RAESLALGGTRT-DVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQR 419
E L R + + + V P LG T S +EPP T + D+R
Sbjct: 94 ERERRELEEKRVQEDEMKKEEHNHTVHPSLGERT-SYVEEPPSTTTTLDRR 143
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical protein
F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.8
Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 2/133 (1%)
Frame = +3
Query: 45 PVEGG*RTGLCRTPAPPERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLP-TKP 221
P+ G RT + T PP+ ++ R PR+ S ET P K AP +P T P
Sbjct: 686 PMTGPSRTEVPMTE-PPKTEQPRTAPPRTEVSMTLPPETVPPKTE----APRTEVPMTGP 740
Query: 222 HRAP-PHRLHETYGTAMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCT 398
R P + G + S +T + PR P+ TV PP T
Sbjct: 741 SRTEVPMTVTPETGLSSTVTS-KTEPPKTTTEKRITPRTE--VPK----TVPPRTGPPMT 793
Query: 399 ASPPDQRPSARAP 437
P + P+ AP
Sbjct: 794 VPPGTEAPTTEAP 806
Score = 28.3 bits (60), Expect = 6.4
Identities = 32/117 (27%), Positives = 38/117 (32%)
Frame = +3
Query: 270 RAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPPXPG 449
R E+ TRT+ PR P R T EPP T +P RP AP
Sbjct: 542 RTEAPETVTTRTEPPRTEPPRTIPPRTEAPR-TEPPRTEPPKTEAPRTVRPKTEAPMTVP 600
Query: 450 TXXXXXXXXXXXXHAPSTPPSALRSRXGIPFPFALLXLTKRHDQVTEPNHGLPRTPV 620
P T P P P + +T + V PN PRT V
Sbjct: 601 PRTEPPMTEAPRTEVPMTEPPKTEPPRTAP-PRTEVSMTLPPETV-PPNTEAPRTEV 655
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +3
Query: 330 RENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPPXPGTXXXXXXXXXXXXHAPSTPP 509
R +P HTV PP + P Q P ++ P P TPP
Sbjct: 456 RPSPPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPP 515
Query: 510 SALRSR 527
A +R
Sbjct: 516 PASSAR 521
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/66 (25%), Positives = 22/66 (33%)
Frame = +3
Query: 330 RENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPPXPGTXXXXXXXXXXXXHAPSTPP 509
R +P HTV PP + P Q P ++ P P TPP
Sbjct: 520 RPSPPSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTPP 579
Query: 510 SALRSR 527
A +R
Sbjct: 580 PASSAR 585
>Z68005-4|CAA91992.2| 430|Caenorhabditis elegans Hypothetical
protein F59F3.2 protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 315 TGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQ---RPSARAPPXPGT 452
T HP +N + G + V PPC PP + R A P PGT
Sbjct: 131 TDGHPGDNGKDGTDGIYQVDEPDCPPCPQGPPGEDGLRGEAGEPGRPGT 179
>AC024810-16|AAO21412.2| 684|Caenorhabditis elegans Cdt (s. pombe
licensing factor)homolog protein 1, isoform b protein.
Length = 684
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 84 PAPP--ERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLP 212
PA P E K R S TP KKAREA A LP
Sbjct: 52 PAAPIVENKSSRTRARTPSRQAELSSSGTPPKKAREAEAEAPELP 96
>AC024810-15|AAF60769.1| 741|Caenorhabditis elegans Cdt (s. pombe
licensing factor)homolog protein 1, isoform a protein.
Length = 741
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 84 PAPP--ERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLP 212
PA P E K R S TP KKAREA A LP
Sbjct: 52 PAAPIVENKSSRTRARTPSRQAELSSSGTPPKKAREAEAEAPELP 96
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +3
Query: 339 PVEPRLGRHTVSGAQEPPCTASPPDQR-PSA--RAPP 440
P P G G + PP T +PP R P A RAPP
Sbjct: 293 PQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPP 329
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Frame = +3
Query: 87 APPERKKGRREGPRSFTSPNFSQETTPXKKAREALAPXERLPTK--PHRAPPHRLHETYG 260
APPE +E + +P + P KK + AP P K P APP R
Sbjct: 195 APPEPPAEPQEAAET-PAP---EPLVPEKKPKIEDAPTTSSPKKSTPTSAPPTRASARVS 250
Query: 261 TAMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQRPSARAPP 440
R + T +T +NPV+ + + + P A + RAPP
Sbjct: 251 KPNRLYADGSFNTEILGRTRI-TEQNPVKEAQAKESTPELADLPLPAGRRKSTAAPRAPP 309
Query: 441 XP 446
P
Sbjct: 310 AP 311
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 78 RTPAPPERKKGRREGPRSFT-SPNFSQETTPXKKAREALAPXERLPTKPHRAPPHRLHET 254
R+P+P R++ E PR + SP + +P K++RE R P+ P R E
Sbjct: 156 RSPSPKRRRR-PSEKPRKRSRSPRRERPRSP-KRSREESRKLSRKPSSSRSKSPRRSRED 213
Query: 255 YGTAMRAESLALGGTRTDV-KTGFHPRENPVEPR 353
R S + + + + PR + EPR
Sbjct: 214 PRKVARKPSRSRSRSAERLRRKSRSPRRSREEPR 247
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 78 RTPAPPERKKGRREGPRSFT-SPNFSQETTPXKKAREALAPXERLPTKPHRAPPHRLHET 254
R+P+P R++ E PR + SP + +P K++RE R P+ P R E
Sbjct: 156 RSPSPKRRRR-PSEKPRKRSRSPRRERPRSP-KRSREESRKLSRKPSSSRSKSPRRSRED 213
Query: 255 YGTAMRAESLALGGTRTDV-KTGFHPRENPVEPR 353
R S + + + + PR + EPR
Sbjct: 214 PRKVARKPSRSRSRSAERLRRKSRSPRRSREEPR 247
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 492 APSTPPSALRSRXGIPF---PFALLXLTKRHDQVTEPNHGLPRTPVL 623
A TP S + SR P P L + K DQ T+P +P++PVL
Sbjct: 162 ASRTPMSQILSRECTPTVSNPQLLTEIAKGVDQPTKPVRDVPQSPVL 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,248,006
Number of Sequences: 27780
Number of extensions: 355656
Number of successful extensions: 1314
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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