Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_J24
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   1.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   8.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 522 SVRVSGDTAQHAAAQLFAWEARAHGLDLHLLAEPTKLQ 409
           +V+ S    QHAA  ++  +   HG  LH+ + P+ +Q
Sbjct: 788 AVQQSQQRHQHAAQMIYGHQQSHHG--LHINSSPSSVQ 823


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 680 SSASQXEPAYPGGHSQVPAEFGP 612
           ++ +   P+YPGG S  P+   P
Sbjct: 74  AAITSTSPSYPGGGSSSPSPSSP 96


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 269 VNTSVWASSSSLGTDWRCS 325
           ++T+VW + +  G + RC+
Sbjct: 88  LHTTVWVAGAQRGNEQRCT 106


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
 Frame = -3

Query: 402 QAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPRELLLAQTEVFTRYXQ----GRHARQR 235
           Q H++   Q    Q +Q   +    ++HLQ+  + ++  Q +      Q    G H RQ+
Sbjct: 167 QMHHQMHTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPGMHPRQQ 226

Query: 234 GREATCQE*I*RGCSNKQPHHSLGLVLARRP 142
            +    Q  +    S +Q     G   A  P
Sbjct: 227 QQAQQHQGVVTSPLSQQQQAAPQGAASANLP 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,912
Number of Sequences: 438
Number of extensions: 3662
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)