Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_I15
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0765 + 11000724-11002496                                         30   2.1  

>03_02_0765 + 11000724-11002496
          Length = 590

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 29/104 (27%), Positives = 30/104 (28%)
 Frame = -2

Query: 767 GXXXXGXGRGXGYXGXXXXQGSXXXXXXXGXGGXXXXAALXG*GWXXXXXXPXXRXGXVP 588
           G    G G G G  G     G        G GG     A  G G            G   
Sbjct: 390 GGLGGGAGAGGGLGGGAGTGGGGGLGGGAGGGGGLGGGAGGGLG---GGAGAGGGFGGGA 446

Query: 587 GXXXXVGLGXGGSGPXXGXXEXXXGXXXXXGAFXGXXGCGRXXG 456
           G     GLG GG+G   G      G     G F G  G G   G
Sbjct: 447 GAGGGGGLG-GGAGGGGGLDGGAGGGAEAGGGFGGGAGAGTGGG 489


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,676,206
Number of Sequences: 37544
Number of extensions: 177081
Number of successful extensions: 379
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)