Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_I14
         (794 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.       33   1.6  
AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.      33   1.6  

>BC040074-1|AAH40074.1|  570|Homo sapiens FAM20C protein protein.
          Length = 570

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -2

Query: 265 RLDGXGGRPTGPPNDEITPPARTADIGAPA-LRLHFR*GAPPRRRLCCGRS---NQRRQR 98
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 18  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 75

Query: 97  VFQSFS 80
           + Q FS
Sbjct: 76  ILQDFS 81


>AF533706-1|AAQ09019.1|  584|Homo sapiens unknown protein protein.
          Length = 584

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -2

Query: 265 RLDGXGGRPTGPPNDEITPPARTADIGAPA-LRLHFR*GAPPRRRLCCGRS---NQRRQR 98
           RL+  G RP+G P      PA  A++ AP   ++  R G PP      G +   N+   R
Sbjct: 32  RLERRGARPSGEPGCSCAQPA--AEVAAPGWAQVRGRPGEPPAASSAAGDAGWPNKHTLR 89

Query: 97  VFQSFS 80
           + Q FS
Sbjct: 90  ILQDFS 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,864,425
Number of Sequences: 237096
Number of extensions: 2549836
Number of successful extensions: 7683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7678
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)