Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_I11
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.4  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    23   2.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   3.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.3  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    23   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -1

Query: 681 EAGEG-AEVPASASA-PLLKCTLCQERLEDTHFVQ-CPSQPHHKFCFPC 544
           E  EG +  P+ AS+   L C   +E L DT F+Q C S+ H   C  C
Sbjct: 311 EKYEGISSTPSQASSCSCLDCDEIRESL-DTQFLQVCRSRRHSDSCCLC 358


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 598 IFQAFLAQGAFE*RCGCGCGHFGAFTGLGXR 690
           +  +FL    F    G G G FG F GLG R
Sbjct: 5   VLASFLLLAVFSMLVG-GFGGFGGFGGLGGR 34


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +3

Query: 492 RWDSTPRIPAVS*SSPGSRGNRTYGAVGWGTARNAYLPSVPGTRCI 629
           RW S PR PA + S  G    +   +V W      Y   +   R I
Sbjct: 44  RWWSRPREPAQTTSKAGIHRKKVLLSVWWDYKGIVYFELLSPNRTI 89


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 630 KCTLCQERLEDTHFVQC 580
           KC+LCQ R E+     C
Sbjct: 273 KCSLCQRRFEEQGNYSC 289


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +1

Query: 598 IFQAFLAQGAFE*RCGCGCGHFGAFTGLGXR 690
           +  +FL    F    G G G FG F GLG R
Sbjct: 5   VLASFLLLAIFSMLVG-GFGGFGGFGGLGGR 34


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 251 STVTISVRSTNLTIDSISLPDDRRNASWTS 162
           +T+T +  +T  T  + + P+  +NAS T+
Sbjct: 659 TTITTTTTTTTTTTTTTTTPNTTQNASATT 688


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,122
Number of Sequences: 438
Number of extensions: 5664
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)