Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_I09
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 31 4.0
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 31 4.0
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 31 4.0
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 31 4.0
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 4.0
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 31 4.0
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 7.0
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 7.0
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 7.0
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 7.0
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 7.0
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 588 PXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPP 686
P P PPG P TS P SPG P + PP
Sbjct: 28 PAGPPGPPGPPGTSGHPGSPG----SPGYQGPP 56
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 600 PXPPGXPNTSXXPASPGLRXXLPXXRSP 683
P PPG P T+ P SPG + + SP
Sbjct: 185 PGPPGPPGTAGFPGSPGAKGEVGPAGSP 212
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 588 PXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPP 686
P P PPG P TS P SPG P + PP
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPG----SPGYQGPP 203
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 600 PXPPGXPNTSXXPASPGLRXXLPXXRSP 683
P PPG P T+ P SPG + + SP
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 588 PXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPP 686
P P PPG P TS P SPG P + PP
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPG----SPGYQGPP 203
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 600 PXPPGXPNTSXXPASPGLRXXLPXXRSP 683
P PPG P T+ P SPG + + SP
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 588 PXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPP 686
P P PPG P TS P SPG P + PP
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPG----SPGYQGPP 203
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 600 PXPPGXPNTSXXPASPGLRXXLPXXRSP 683
P PPG P T+ P SPG + + SP
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +3
Query: 579 PXXPXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPPXPXXP 701
P P P PP P +S P P LP +PP P P
Sbjct: 327 PLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGP 367
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 588 PXXXPXPPGXPNTSXXPASPGLRXXLPXXRSPP 686
P P PPG P TS P SPG P + PP
Sbjct: 175 PAGPPGPPGPPGTSGHPGSPG----SPGYQGPP 203
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 600 PXPPGXPNTSXXPASPGLRXXLPXXRSP 683
P PPG P T+ P SPG + + SP
Sbjct: 332 PGPPGPPGTAGFPGSPGAKGEVGPAGSP 359
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PXXPXXXPX--PPGXPNTSXXPASPGLRXXLPXXRSP-PXPXXP 701
P P P PPG P P PGLR LP P P P P
Sbjct: 424 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PXXPXXXPX--PPGXPNTSXXPASPGLRXXLPXXRSP-PXPXXP 701
P P P PPG P P PGLR LP P P P P
Sbjct: 183 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 226
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PXXPXXXPX--PPGXPNTSXXPASPGLRXXLPXXRSP-PXPXXP 701
P P P PPG P P PGLR LP P P P P
Sbjct: 424 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PXXPXXXPX--PPGXPNTSXXPASPGLRXXLPXXRSP-PXPXXP 701
P P P PPG P P PGLR LP P P P P
Sbjct: 424 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 30.7 bits (66), Expect = 7.0
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 579 PXXPXXXPX--PPGXPNTSXXPASPGLRXXLPXXRSP-PXPXXP 701
P P P PPG P P PGLR LP P P P P
Sbjct: 424 PGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRP 467
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,082,999
Number of Sequences: 237096
Number of extensions: 914295
Number of successful extensions: 5744
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5442
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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