Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_I05
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   132   3e-31

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  132 bits (319), Expect = 3e-31
 Identities = 70/149 (46%), Positives = 88/149 (59%)
 Frame = -2

Query: 592 GAXEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSL 413
           GA E+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+  E+LR +F +GV NVA++SL
Sbjct: 168 GASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSL 227

Query: 412 AIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXX 233
           A+ YPT+AS  HS+ANG +N+L               IK FI DPSKF            
Sbjct: 228 AVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAA 283

Query: 232 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 146
                             SDDDMGFGLFD
Sbjct: 284 AAPAAAAPAAKKEEPKEESDDDMGFGLFD 312



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 741 PXSXXXPAXNTGXGXREDLFXPGXFYPYQNFKGYY*IINDVHILKPGDK 595
           P     P  NTG G  +  F      P +  +G   I+NDVH++K GDK
Sbjct: 118 PCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDK 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,068,110
Number of Sequences: 27780
Number of extensions: 236462
Number of successful extensions: 564
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)