Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_H22
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 42 8e-04
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 36 0.054
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.22
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.66
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.0
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.5
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 3.5
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 3.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.2
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 41.5 bits (93), Expect = 8e-04
Identities = 38/142 (26%), Positives = 39/142 (27%), Gaps = 4/142 (2%)
Frame = -3
Query: 915 GXGWXXGXXXGTGXGRXGXXXGX--GXFXXGXXXXXGXXGXXXXGXXXXXGXXXXXXGXX 742
G G G G G G G G G G G G G G G
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGY 165
Query: 741 XGXGXGAGGWGXXXXLGXGEXXXWXRXXXVXXXRXXXAIXGXXGXGGXXXXGG--XGXXX 568
G G G GG+G G G G G GG GG G
Sbjct: 166 GGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGP 225
Query: 567 XXXXAGXXGXGGAXXXXGGXGG 502
G G GG GG GG
Sbjct: 226 SGGYGGGYGPGGGYGMGGGGGG 247
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/121 (26%), Positives = 34/121 (28%), Gaps = 1/121 (0%)
Frame = -3
Query: 831 GXXXXXGXXGXXXXGXXXXXGXXXXXXGXXXGXGXGAGGWGXXXXLGXGEXXXWXRXXXV 652
G G G G G G G G G GG+G G G+
Sbjct: 75 GRGGYGGSGGGAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGG 134
Query: 651 XXXRXXXAIXGXXGXGGXXXXGGXGXXXXXXXAGXXGXGG-AXXXXGGXGGXXFYXXGXX 475
G G GG GG G G G GG GG GG F G
Sbjct: 135 GGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMG 194
Query: 474 G 472
G
Sbjct: 195 G 195
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +2
Query: 692 PXXXXXPHPPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXXPXXXXXPXXNXPXPXXXPLL 871
P P PP P P P P P P P P P P P +
Sbjct: 43 PQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPMPVAPPAPAPAYNPYPCATPPCPLPYI 102
Query: 872 PXPVPXXXPXXXPXP 916
P PV P P P
Sbjct: 103 PEPV---APVPAPAP 114
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.22
Identities = 28/112 (25%), Positives = 29/112 (25%)
Frame = +1
Query: 403 PXXCTXXXPXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPX 582
P T P P P RP P P PP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 583 PPGXXTXPXPXXTXDRXXXPXXLNXXXPSPXXXFTXPXXXXXPPPPRPRXPP 738
PPG P P R P + P P P PPP RP PP
Sbjct: 327 PPGMGGMPPPPPPGMRY--PGGM-PPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 31.9 bits (69), Expect = 0.66
Identities = 21/89 (23%), Positives = 24/89 (26%)
Frame = +2
Query: 473 PXXPXL*XXQPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXIAXXXLXXX 652
P P + PP PP P P P+ P PP P P P +
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 324
Query: 653 TXXXLXXXXXSPXPXXXXXPHPPAPXPXP 739
P P P P P P
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/99 (25%), Positives = 26/99 (26%)
Frame = +1
Query: 427 PXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPXPPGXXTXP 606
P P PP P TP PP P P PPG P
Sbjct: 261 PPVPPPPPSV--TPMPPPMPPTPGMTPRPPPPPSSGMWPPPP-PPPPGRTPGPPGMPGMP 317
Query: 607 XPXXTXDRXXXPXXLNXXXPSPXXXFTXPXXXXXPPPPR 723
P P + P P P PPPPR
Sbjct: 318 PP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Frame = +2
Query: 713 HPPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXX----PXXXXXPXXNXPXPXXXPLLPXP 880
+PP P P P P P P P P P P P P +P P
Sbjct: 260 YPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 881 VP 886
P
Sbjct: 320 PP 321
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/127 (22%), Positives = 30/127 (23%), Gaps = 1/127 (0%)
Frame = +2
Query: 533 PPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXIAXXXLXXXTXXXLXXXXXSPXPXXXXXP 712
PP P P P PP P P P + P P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS------------GMWPPPPPPPPGRTP 308
Query: 713 HPPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXXPXXXXXPXXNXP-XPXXXPLLPXPVPX 889
PP P P P P P P P P P + P P
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Query: 890 XXPXXXP 910
P P
Sbjct: 369 SRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.22
Identities = 28/112 (25%), Positives = 29/112 (25%)
Frame = +1
Query: 403 PXXCTXXXPXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPX 582
P T P P P RP P P PP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 583 PPGXXTXPXPXXTXDRXXXPXXLNXXXPSPXXXFTXPXXXXXPPPPRPRXPP 738
PPG P P R P + P P P PPP RP PP
Sbjct: 337 PPGMGGMPPPPPPGMRY--PGGM-PPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 31.9 bits (69), Expect = 0.66
Identities = 21/89 (23%), Positives = 24/89 (26%)
Frame = +2
Query: 473 PXXPXL*XXQPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXIAXXXLXXX 652
P P + PP PP P P P+ P PP P P P +
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSR 334
Query: 653 TXXXLXXXXXSPXPXXXXXPHPPAPXPXP 739
P P P P P P
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/99 (25%), Positives = 26/99 (26%)
Frame = +1
Query: 427 PXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPXPPGXXTXP 606
P P PP P TP PP P P PPG P
Sbjct: 271 PPVPPPPPSV--TPMPPPMPPTPGMTPRPPPPPSSGMWPPPP-PPPPGRTPGPPGMPGMP 327
Query: 607 XPXXTXDRXXXPXXLNXXXPSPXXXFTXPXXXXXPPPPR 723
P P + P P P PPPPR
Sbjct: 328 PP--PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Frame = +2
Query: 713 HPPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXX----PXXXXXPXXNXPXPXXXPLLPXP 880
+PP P P P P P P P P P P P P +P P
Sbjct: 270 YPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 881 VP 886
P
Sbjct: 330 PP 331
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/127 (22%), Positives = 30/127 (23%), Gaps = 1/127 (0%)
Frame = +2
Query: 533 PPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXIAXXXLXXXTXXXLXXXXXSPXPXXXXXP 712
PP P P P PP P P P + P P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS------------GMWPPPPPPPPGRTP 318
Query: 713 HPPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXXPXXXXXPXXNXP-XPXXXPLLPXPVPX 889
PP P P P P P P P P P + P P
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Query: 890 XXPXXXP 910
P P
Sbjct: 379 SRPPAPP 385
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPX---PXXPXIAXXXLXXXTXXXLXX 673
PP PP PP P PP PP P P IA T +
Sbjct: 508 PPTPP-----PPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPP 562
Query: 674 XXXSPXPXXXXXPHPPAPXPXP 739
P P PP P P P
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPP 584
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 716 PPAPXPXPXXXPXXXXXXPXXXXXPXXXXPXXPXXXXXPXXNXPXPXXXPLLPXPVPXXX 895
PP P P P P P P P P P P P P P+P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP--PPPPPMCPPPPPPMPSYS 85
Query: 896 PXXXPXPA 919
P PA
Sbjct: 86 PCQSYAPA 93
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
PP PP PP P P PP PP P P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 711 PTPPPPXPXXXXXXXXXXXXPXSXXSPTXXXPXPPP 818
P PPPP P P PT P PPP
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +3
Query: 717 PPPPXPXXXXXXXXXXXXPXSXXSPTXXXPXPPPXPXRPXXTXPXXRXXXSSRXXXPXXX 896
PPPP P P P P PP P RP T P + P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP-PRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 897 XXPXXP 914
P P
Sbjct: 182 NPPRTP 187
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 506 PXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
P PP PP P P P PP P P P
Sbjct: 157 PQPPRFAEVPPIPDAPTNPPTTTTPPPPPPTRAPRPIIP 195
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Frame = -3
Query: 750 GXXXGXGX-GAGGWGXXXXLGXGEXXXWXRXXXVXXXRXXXAIXGXXGXGGXXXXGGXGX 574
G G G G GGWG G G+ GG GG G
Sbjct: 44 GGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGD 103
Query: 573 XXXXXXAGXXGXGGAXXXXGGXGG 502
G GG GG GG
Sbjct: 104 WGGNNNGGGGNWGGGGNNDGGWGG 127
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/115 (23%), Positives = 29/115 (25%)
Frame = -3
Query: 846 GXFXXGXXXXXGXXGXXXXGXXXXXGXXXXXXGXXXGXGXGAGGWGXXXXLGXGEXXXWX 667
G + G G G G G G G GGWG G G
Sbjct: 179 GGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQ 238
Query: 666 RXXXVXXXRXXXAIXGXXGXGGXXXXGGXGXXXXXXXAGXXGXGGAXXXXGGXGG 502
+ G G GG G G G GG GG GG
Sbjct: 239 QQQGGGGWGQQGG-GGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGG 292
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/115 (23%), Positives = 29/115 (25%)
Frame = -3
Query: 846 GXFXXGXXXXXGXXGXXXXGXXXXXGXXXXXXGXXXGXGXGAGGWGXXXXLGXGEXXXWX 667
G + G G G G G G G GGWG G G
Sbjct: 217 GGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQ 276
Query: 666 RXXXVXXXRXXXAIXGXXGXGGXXXXGGXGXXXXXXXAGXXGXGGAXXXXGGXGG 502
+ G G GG G G G GG GG GG
Sbjct: 277 QQQGGGGWGQQGG-GGQGGWGGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGG 330
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 482 PXL*XXQPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXI 628
P + PP PP PP P P P PP P P I
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 415 TXXXPXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPXPPGX 594
T P P PP P P + T PP P G P PPG
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGG 767
Query: 595 XTXPXP 612
P P
Sbjct: 768 CPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 482 PXL*XXQPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXI 628
P + PP PP PP P P P PP P P I
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 415 TXXXPXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPXPPGX 594
T P P PP P P + T PP P G P PPG
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGG 767
Query: 595 XTXPXP 612
P P
Sbjct: 768 CPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 482 PXL*XXQPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXPXI 628
P + PP PP PP P P P PP P P I
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 383
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +1
Query: 415 TXXXPXXPXXPPXXXRPXXPXXXXXIKXXTPXPPXXXXXXTXPXXXGXXXXTXXPXPPGX 594
T P P PP P P + T PP P G P PPG
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG--GPPPPPPPPGG 350
Query: 595 XTXPXP 612
P P
Sbjct: 351 CPPPPP 356
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 711 PTPPPPXPXXXXXXXXXXXXPXSXXSPTXXXPXPPPXPXRPXXTXPXXRXXXSS 872
P PPPP + P P PPP P P P SS
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQTPSASS 377
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +3
Query: 711 PTPPPPXPXXXXXXXXXXXXPXSXXSPTXXXP-XPPPXPXRP 833
P PPPP P P P P PPP P P
Sbjct: 88 PLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
PP PP P P P P P PP P P
Sbjct: 169 PPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGP 208
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.2
Identities = 36/150 (24%), Positives = 37/150 (24%), Gaps = 10/150 (6%)
Frame = +2
Query: 500 QPPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXX------PPXPXXPXIAXXXLXXXTXX 661
QPP PP P A P PP P P P
Sbjct: 25 QPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPL 84
Query: 662 XLXXXXXSPXPXXXXXPHP----PAPXPXPXXXPXXXXXXPXXXXXPXXXXPXXPXXXXX 829
P P P+P PAP P P P P P P P
Sbjct: 85 ASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAP----APYQQQP--PPPPPP 138
Query: 830 PXXNXPXPXXXPLLPXPVPXXXPXXXPXPA 919
P P P P P P P PA
Sbjct: 139 PHYPPPPPHYPPPPPAPHSAYIDHSAPRPA 168
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +1
Query: 568 TXXPXPPGXXTXPXPXXTXDRXXXPXXLNXXXPSPXXXFTXPXXXXXPPPPRPRXPP 738
T P PP P P + + P P P PPPP P PP
Sbjct: 469 TPKPAPPPPSRIPNPSPSPQPAEVSK--SPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 847 GXVXXGRXGXGGGXGXXXVGXXXXXGXXXXXXXXXXXXGXGGGGVGXXXXXXGG 686
G G G GGG G G G G GGGG G GG
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGG 136
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 675 PXLHPPXXXXXXPTPPPPXPXXXXXXXXXXXXPXSXXSPTXXXPXPPPXPXRP 833
P P P PPP P P P P PPP P RP
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP-RP 91
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
PP P PP P P PP PP P P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
PP P PP P P PP PP P P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 503 PPXPPX*XXAPPXPXXPAXXXXXXXPXPPXXXXPPXPXXP 622
PP P PP P P PP PP P P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,875,217
Number of Sequences: 27780
Number of extensions: 181465
Number of successful extensions: 1683
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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