BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_H17
(811 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011121-1|AAR82788.1| 408|Drosophila melanogaster LD13390p pro... 206 3e-53
AF333187-1|AAK60520.1| 386|Drosophila melanogaster beta-alanine... 206 3e-53
AE014297-636|AAF54141.2| 386|Drosophila melanogaster CG3027-PA ... 206 3e-53
AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua prot... 29 7.5
AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA... 29 7.5
D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life typ... 29 9.9
AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p pro... 29 9.9
AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,... 29 9.9
AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,... 29 9.9
AE013599-879|AAF58925.1| 301|Drosophila melanogaster CG1874-PA ... 29 9.9
>BT011121-1|AAR82788.1| 408|Drosophila melanogaster LD13390p
protein.
Length = 408
Score = 206 bits (503), Expect = 3e-53
Identities = 106/220 (48%), Positives = 132/220 (60%)
Frame = -2
Query: 792 ERXGXHSDILWXXXXVIXDTGNVIGKHRKNHIXESRRF*RIXLLXWKVTPAILYSRPDTA 613
ER H + +W VI ++G +GKHRKNHI F T ++ +
Sbjct: 191 ERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFET-EFG 249
Query: 612 RSR*TSASDGXHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTA 433
+ H NWMMFG NGAEIVFNPSATI SE +W++EARNAAI N YFT
Sbjct: 250 KLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTV 307
Query: 432 AINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDL 253
INRVG E+FPNE+TS DG AHK+ G FYGSSY PDG R P LSR +DGLL+ +DL
Sbjct: 308 PINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDL 367
Query: 252 NLNRQIRDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 133
NL RQ++D + MTQR+ +Y S K E +KPQ++ E
Sbjct: 368 NLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKE 407
Score = 50.8 bits (116), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -1
Query: 673 DPTTXMEGNXGHPVFATRYGKIAVNICFGR 584
+ T MEGN GHPVF T +GK+AVNIC+GR
Sbjct: 230 ESTYYMEGNTGHPVFETEFGKLAVNICYGR 259
>AF333187-1|AAK60520.1| 386|Drosophila melanogaster beta-alanine
synthase protein.
Length = 386
Score = 206 bits (503), Expect = 3e-53
Identities = 106/220 (48%), Positives = 132/220 (60%)
Frame = -2
Query: 792 ERXGXHSDILWXXXXVIXDTGNVIGKHRKNHIXESRRF*RIXLLXWKVTPAILYSRPDTA 613
ER H + +W VI ++G +GKHRKNHI F T ++ +
Sbjct: 169 ERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFET-EFG 227
Query: 612 RSR*TSASDGXHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTA 433
+ H NWMMFG NGAEIVFNPSATI SE +W++EARNAAI N YFT
Sbjct: 228 KLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTV 285
Query: 432 AINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDL 253
INRVG E+FPNE+TS DG AHK+ G FYGSSY PDG R P LSR +DGLL+ +DL
Sbjct: 286 PINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDL 345
Query: 252 NLNRQIRDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 133
NL RQ++D + MTQR+ +Y S K E +KPQ++ E
Sbjct: 346 NLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKE 385
Score = 50.8 bits (116), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -1
Query: 673 DPTTXMEGNXGHPVFATRYGKIAVNICFGR 584
+ T MEGN GHPVF T +GK+AVNIC+GR
Sbjct: 208 ESTYYMEGNTGHPVFETEFGKLAVNICYGR 237
>AE014297-636|AAF54141.2| 386|Drosophila melanogaster CG3027-PA
protein.
Length = 386
Score = 206 bits (503), Expect = 3e-53
Identities = 106/220 (48%), Positives = 132/220 (60%)
Frame = -2
Query: 792 ERXGXHSDILWXXXXVIXDTGNVIGKHRKNHIXESRRF*RIXLLXWKVTPAILYSRPDTA 613
ER H + +W VI ++G +GKHRKNHI F T ++ +
Sbjct: 169 ERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVGDFNESTYYMEGNTGHPVFET-EFG 227
Query: 612 RSR*TSASDGXHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTA 433
+ H NWMMFG NGAEIVFNPSATI SE +W++EARNAAI N YFT
Sbjct: 228 KLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRL--SEPLWSIEARNAAIANSYFTV 285
Query: 432 AINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDL 253
INRVG E+FPNE+TS DG AHK+ G FYGSSY PDG R P LSR +DGLL+ +DL
Sbjct: 286 PINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDL 345
Query: 252 NLNRQIRDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 133
NL RQ++D + MTQR+ +Y S K E +KPQ++ E
Sbjct: 346 NLCRQVKDFWGFRMTQRVPLYAESFKKASEHGFKPQIIKE 385
Score = 50.8 bits (116), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -1
Query: 673 DPTTXMEGNXGHPVFATRYGKIAVNICFGR 584
+ T MEGN GHPVF T +GK+AVNIC+GR
Sbjct: 208 ESTYYMEGNTGHPVFETEFGKLAVNICYGR 237
>AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua
protein.
Length = 1403
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 657 WKVTPA-ILYSRPDTARSR*TSASDGXHVLNWMMFGQNGAEIVFNPSAT 514
WK TP+ +LY+ + + + TS+S+ + NW + + + +AT
Sbjct: 86 WKTTPSPVLYNANNNSSNNNTSSSNNNNNSNWEVGSNSNTHVAATAAAT 134
>AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA
protein.
Length = 1403
Score = 29.1 bits (62), Expect = 7.5
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 657 WKVTPA-ILYSRPDTARSR*TSASDGXHVLNWMMFGQNGAEIVFNPSAT 514
WK TP+ +LY+ + + + TS+S+ + NW + + + +AT
Sbjct: 86 WKTTPSPVLYNANNNSSNNNTSSSNNNNNSNWEVGSNSNTHVAATAAAT 134
>D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life type 2
protein.
Length = 2044
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 168 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 263
V+C DC R+C + SC N CL + S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524
>AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p
protein.
Length = 2061
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 168 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 263
V+C DC R+C + SC N CL + S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524
>AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,
isoform A protein.
Length = 2052
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 168 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 263
V+C DC R+C + SC N CL + S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524
>AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,
isoform C protein.
Length = 2061
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 168 VLC*DCSRTCPGVGSCNNNVCL*SVCSGSSPR 263
V+C DC R+C + SC N CL + S PR
Sbjct: 494 VICHDC-RSCAPLLSCRNRKCLNAAKCNSLPR 524
>AE013599-879|AAF58925.1| 301|Drosophila melanogaster CG1874-PA
protein.
Length = 301
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 522 SATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEE 406
+ATIAG G SE EA + ++ + A+N VG E+
Sbjct: 229 TATIAGAGASETDAEAEATTNSNSSSFEADALNEVGIED 267
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,369,849
Number of Sequences: 53049
Number of extensions: 651480
Number of successful extensions: 2140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2134
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -