Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_H15
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.33
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.76
SPBC21C3.10c |||5-amino-6-|Schizosaccharomyces pombe|chr 2|||Manual 29 1.00
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 28 1.3
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 27 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.0
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 27 3.0
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 27 3.0
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 27 4.0
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.3
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 5.3
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 26 5.3
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 7.0
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 26 7.0
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.0
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 25 9.3
SPCC1393.11 |||mitochondrial ribosomal protein subunit L20|Schiz... 25 9.3
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.3
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 25 9.3
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.3 bits (65), Expect = 0.33
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = -1
Query: 636 NIHFHQSPDAVLEGVRAGXKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLI 457
N +F +P +EG+ A P + S P+ VSPP S A+
Sbjct: 123 NNNFGLAPRNYVEGMDASSAPASQEPSASGVNAPTVSAPNSMVSPPP-SFQPPSAAAPAT 181
Query: 456 SRHSTHTPLPPSNSPP 409
S S + P PP PP
Sbjct: 182 SLPSDYNPPPPPPPPP 197
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.76
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 618 SPDAVLEGVRAGXKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTH 439
+P ++ + + KPPL PS+ ++ ++L K PP + ++ I S++
Sbjct: 276 APVSMNPAINSTSKPPLPP--PSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSN 333
Query: 438 TPLPPSNSPP 409
+ LPP PP
Sbjct: 334 SSLPPPPPPP 343
>SPBC21C3.10c |||5-amino-6-|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 28.7 bits (61), Expect = 1.00
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -1
Query: 726 LCIKPPXPXDXGYINPIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGXKPPLSSEAPSA 547
L K P P + + P+ K PIP L + + L R G KPPL APS
Sbjct: 76 LTAKLPDPANPDCLLPLNKQPIPIIVDSNLRLDYASLKVIRLARERLG-KPPLIIVAPSI 134
Query: 546 Y 544
+
Sbjct: 135 W 135
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 108 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 236
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -1
Query: 657 YTNHPRLNIHFHQSPDAVLEGVRAGXKPPLSSEAPSAYLTPSSLGMXKGVSPPY-FQVND 481
+ N P + F ++ GV PP SS+ P Y+ KG+S Y VND
Sbjct: 14 WENKPEEVVEFPSQGKFIIVGVPGAFTPPCSSQVP-GYIANEKQFAAKGISGIYVVAVND 72
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -1
Query: 663 IPYT--NHPRLNIHFHQSPDAVLE-GVRAGXKPPLSSEAPSAYLTPS 532
+PYT NHP+ +I FH + V + KP ++S+A +A + S
Sbjct: 27 LPYTARNHPQFSIWFHNDFEPVKDLKALLKDKPQIASQAVTALVNVS 73
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 263 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 168
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -1
Query: 534 SSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPPSNSPP 409
S+ G V+P Y + + + ++ + + PPSN+PP
Sbjct: 51 SAKGPPSFVTPEYIEKQRQKKLEKMAKKAARKPIAPPSNAPP 92
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 564 SEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPPSNSPP 409
S +PS Y + +S K + V+ ++ +S +P+PPSN PP
Sbjct: 171 STSPSNYASRASSPDMKSSAAVTANVSPIQNVAQHVSTLPKISPIPPSNPPP 222
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 732 SPLCIKPPXPXDXGYINPIIKSPIPYTNHPRLNIHFHQSPD 610
+PL PP P D + NP++ P + P +F +P+
Sbjct: 212 APLSGPPPQPGDIVFSNPMLGGPDHKVSQPSETENFLPTPE 252
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 473 KLRALLVVIPRILRSPPPTHPLIEDV 396
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.2 bits (55), Expect = 5.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 476 DSSFT*K*GGETPLXMPSDEGVRYADGASDDNGGFXPARTPSS 604
+SSF G TPL D G YAD A+ N PA TP +
Sbjct: 160 NSSFVGNSGSGTPLD--GDSGSFYADSANLTNREPYPAWTPEN 200
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 480 ESQASRLISRHSTHTPLPPSNSPPHRRRCHGHKPS 376
E+ ASRL+ H T L P H + H +P+
Sbjct: 77 EALASRLLKGHMTQLSLRTILPPAHTKNLHRQQPT 111
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -1
Query: 570 LSSEAPSAYLTPSSLGMXKGVSPPYFQVNDESQASRLISRHSTHTPLPPSNSPP 409
+SS + S +++ S + G PY N +SR ++ H +PP
Sbjct: 460 VSSSSASRFMSKVSSNLNSGNPTPYNSYNGTPTSSRFVAFFDRHRQESEKATPP 513
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 338 LVTHKELALKVSSIIGTRVYAFDPSCY 258
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 150 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 52
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 25.4 bits (53), Expect = 9.3
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = -2
Query: 362 KVKIADNNLVTHKELALKVSSIIGTRVYAFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 183
K K+ D V K + +S T+ + + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 182 LSASIQASLPSSEIYRQL 129
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPCC1393.11 |||mitochondrial ribosomal protein subunit
L20|Schizosaccharomyces pombe|chr 3|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 9.3
Identities = 21/91 (23%), Positives = 33/91 (36%)
Frame = -1
Query: 687 INPIIKSPIPYTNHPRLNIHFHQSPDAVLEGVRAGXKPPLSSEAPSAYLTPSSLGMXKGV 508
I P P+ + LN + + + G K +E SAY P + +
Sbjct: 5 IKPSFLKPVGFIQTRNLNRLYPKQRIPKRPKIPMGSKIAEVTETTSAYYNPPASSPDVRI 64
Query: 507 SPPYFQVNDESQASRLISRHSTHTPLPPSNS 415
+PP F+ + R S LPP+ S
Sbjct: 65 TPPVFRYDAPPIHQRDTSLSKESMFLPPAVS 95
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 123 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 224
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.4 bits (53), Expect = 9.3
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -1
Query: 609 AVLEGVRAGXKPPLSSEAPSAYLTPSSLG-MXKGVSPPY-FQVNDESQASRLISRHSTHT 436
A + G++ K P SS++PS + S+L + K F ND + S SRH +
Sbjct: 89 AAISGIQPPPKTP-SSDSPSLENSLSNLNDLFKSRGRHMAFSKNDGTNLSLPPSRHQSPP 147
Query: 435 PLPPSNSPPHRRR 397
P S H RR
Sbjct: 148 PSSVLASQRHHRR 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,972,363
Number of Sequences: 5004
Number of extensions: 62213
Number of successful extensions: 196
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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