Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_H11
         (850 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0441 - 14037497-14038006,14038208-14038369                       29   6.2  
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768...    29   6.2  

>05_03_0441 - 14037497-14038006,14038208-14038369
          Length = 223

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +3

Query: 264 DHSGSGVRSQVLERLEMRLR-SGGDGARRQRCTRHTXA 374
           D  G  +RS   +R   R R   GDG RR++C R   A
Sbjct: 2   DVGGGRIRSATGKRCSWRWRLDHGDGGRREKCARRLNA 39


>02_04_0480 -
           23274945-23275196,23275558-23275623,23276709-23276851,
           23276947-23277063,23277219-23278683,23279561-23280730
          Length = 1070

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 300 ERLEMRLRSGGDGARRQRCTRHTXAXE 380
           ERL   ++SGG GA ++R  RHT + +
Sbjct: 471 ERLHFSVKSGGKGAVKKRKERHTLSDD 497


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,164,381
Number of Sequences: 37544
Number of extensions: 168520
Number of successful extensions: 388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)