Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_H10
         (820 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p pro...    39   0.007
AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal pr...    39   0.007
AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE...    39   0.007
AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB...    39   0.007
AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA...    39   0.007

>BT011339-1|AAR96131.1|  465|Drosophila melanogaster RH62603p
           protein.
          Length = 465

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -3

Query: 428 GXXTKXXXVILNNXYIEYDMCERXXTPXGXFXXXXXVYXXFVXIXGXLHGTXK 270
           G  TK   VI NN   EYD+ ++  TP G F     V   FV I G   G+ K
Sbjct: 301 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 353



 Score = 33.1 bits (72), Expect = 0.47
 Identities = 21/58 (36%), Positives = 23/58 (39%)
 Frame = -1

Query: 292 GXCMGXIKXIXXLXXXLXVXTXRGALXKIYXXXXDTSXXFXXXXXXXPXDKXAXXGTL 119
           G C+G  K I  L   L   T R AL +I     DTS          P DK A  G L
Sbjct: 346 GCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 403


>AF016835-1|AAC26144.1|  416|Drosophila melanogaster ribosomal
           protein L3 protein.
          Length = 416

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -3

Query: 428 GXXTKXXXVILNNXYIEYDMCERXXTPXGXFXXXXXVYXXFVXIXGXLHGTXK 270
           G  TK   VI NN   EYD+ ++  TP G F     V   FV I G   G+ K
Sbjct: 290 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342



 Score = 33.1 bits (72), Expect = 0.47
 Identities = 21/58 (36%), Positives = 23/58 (39%)
 Frame = -1

Query: 292 GXCMGXIKXIXXLXXXLXVXTXRGALXKIYXXXXDTSXXFXXXXXXXPXDKXAXXGTL 119
           G C+G  K I  L   L   T R AL +I     DTS          P DK A  G L
Sbjct: 335 GCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 392


>AE014297-1265|AAF54609.1|  403|Drosophila melanogaster CG4863-PE,
           isoform E protein.
          Length = 403

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -3

Query: 428 GXXTKXXXVILNNXYIEYDMCERXXTPXGXFXXXXXVYXXFVXIXGXLHGTXK 270
           G  TK   VI NN   EYD+ ++  TP G F     V   FV I G   G+ K
Sbjct: 277 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329



 Score = 33.1 bits (72), Expect = 0.47
 Identities = 21/58 (36%), Positives = 23/58 (39%)
 Frame = -1

Query: 292 GXCMGXIKXIXXLXXXLXVXTXRGALXKIYXXXXDTSXXFXXXXXXXPXDKXAXXGTL 119
           G C+G  K I  L   L   T R AL +I     DTS          P DK A  G L
Sbjct: 322 GCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 379


>AE014297-1264|AAN13496.1|  403|Drosophila melanogaster CG4863-PB,
           isoform B protein.
          Length = 403

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -3

Query: 428 GXXTKXXXVILNNXYIEYDMCERXXTPXGXFXXXXXVYXXFVXIXGXLHGTXK 270
           G  TK   VI NN   EYD+ ++  TP G F     V   FV I G   G+ K
Sbjct: 277 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 329



 Score = 33.1 bits (72), Expect = 0.47
 Identities = 21/58 (36%), Positives = 23/58 (39%)
 Frame = -1

Query: 292 GXCMGXIKXIXXLXXXLXVXTXRGALXKIYXXXXDTSXXFXXXXXXXPXDKXAXXGTL 119
           G C+G  K I  L   L   T R AL +I     DTS          P DK A  G L
Sbjct: 322 GCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 379


>AE014297-1262|AAF54610.2|  416|Drosophila melanogaster CG4863-PA,
           isoform A protein.
          Length = 416

 Score = 39.1 bits (87), Expect = 0.007
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -3

Query: 428 GXXTKXXXVILNNXYIEYDMCERXXTPXGXFXXXXXVYXXFVXIXGXLHGTXK 270
           G  TK   VI NN   EYD+ ++  TP G F     V   FV I G   G+ K
Sbjct: 290 GIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKK 342



 Score = 33.1 bits (72), Expect = 0.47
 Identities = 21/58 (36%), Positives = 23/58 (39%)
 Frame = -1

Query: 292 GXCMGXIKXIXXLXXXLXVXTXRGALXKIYXXXXDTSXXFXXXXXXXPXDKXAXXGTL 119
           G C+G  K I  L   L   T R AL +I     DTS          P DK A  G L
Sbjct: 335 GCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPL 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,158,485
Number of Sequences: 53049
Number of extensions: 78769
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)