Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_H08
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 145 4e-35
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.6
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 4.8
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 29 4.8
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 29 4.8
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.4
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.5
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.5
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.5
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 145 bits (351), Expect = 4e-35
Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
Frame = -2
Query: 686 AYCGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 507
A GRF+PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +
Sbjct: 98 AIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLI 157
Query: 506 DIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRXP 357
DI +PCN K SIGLMWW+LARE+L LRG + R + +++ DL+FYR P
Sbjct: 158 DIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDP 212
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -3
Query: 769 NPADVFVISSRPFGQRAVLKFAAHTGATXI 680
NPADV V+S+RP+ QRA+LKFAAHTGAT I
Sbjct: 70 NPADVVVVSARPYAQRALLKFAAHTGATAI 99
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 670 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 670 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 670 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 670 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 518
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 275 MDRSNYFWFSWYHSLFPGLLFILFTFFRXHGRRTNQ 382
M ++F FS + GLLFI +F + HG T++
Sbjct: 690 MQMDSFFMFSLIRDISNGLLFIHNSFLKCHGHLTSR 725
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 215 CCTRCSSCFWSTPCSRRMVCP 153
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -2
Query: 758 CVRHLITALRSACCTEVCRAHR-CYAYCG 675
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -2
Query: 758 CVRHLITALRSACCTEVCRAHR-CYAYCG 675
C R T R+ CCT C R C CG
Sbjct: 94 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -2
Query: 758 CVRHLITALRSACCTEVCRAHR-CYAYCG 675
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -2
Query: 758 CVRHLITALRSACCTEVCRAHR-CYAYCG 675
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = -2
Query: 758 CVRHLITALRSACCTEVCRAHR-CYAYCG 675
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 284 SNYFWFSWYHSLFPGLLFILFTFFR 358
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 284 SNYFWFSWYHSLFPGLLFILFTFFR 358
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 536 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 429
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 564 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 457
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 166 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 261
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 485 TKSSHSIGLMWWLLA 441
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 166 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 261
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,012,281
Number of Sequences: 27780
Number of extensions: 355434
Number of successful extensions: 1062
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -