Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_H06
         (796 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    58   5e-08
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      32   2.7  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    32   2.7  
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   4.8  
AF332228-1|AAK13480.1|  230|Homo sapiens melanoma-associated cho...    30   8.4  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +3

Query: 588 MIGRADIEGSKSNVAMNAWLPQASYPGGTF 677
           MIGRADIEGSKS+VAMNAW PQASYP G F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 364 TPLRPKPV*PNPARICSLWSPESRE 290
           TP  P PV P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 364 TPLRPKPV*PNPARICSLWSPESRE 290
           TP  P PV P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +1

Query: 37  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 171
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>AF332228-1|AAK13480.1|  230|Homo sapiens melanoma-associated
           chondroitin sulfate proteoglycan-like protein.
          Length = 230

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +3

Query: 210 PRSKWASTSRLAF*MRNATSKVTLFRASRLSGLHSEHILAGFG*TGFG 353
           P S WA TS  A  MR+ T+  T       S   S+H L   G  G+G
Sbjct: 107 PSSTWAPTSTSAVGMRSTTTSQTALAGDSCSRPLSQHSLRPEGPAGWG 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,229,053
Number of Sequences: 237096
Number of extensions: 2557110
Number of successful extensions: 5946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5939
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)