Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_H02
(826 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.35
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.46
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.6
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 26 7.5
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 7.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.003
Identities = 29/111 (26%), Positives = 31/111 (27%), Gaps = 1/111 (0%)
Frame = +1
Query: 469 PPXXPAXPSPPXXXPXXXGXXXPXPXPXXQSXPXXXXXXPXGPPPXXRXXHPPPXXXXXX 648
PP +PP P P P P P P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPS-GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 649 XPXXSXXSXXXXXXXXXXLPXPXXPPQXPPAXXXSXXXXPXPPPPT-PPXP 798
P S P P P + PP S P PPP T PP P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/110 (20%), Positives = 27/110 (24%), Gaps = 3/110 (2%)
Frame = +1
Query: 469 PPXXPAXPSPPXXXPXXXGXXXPXPXPXXQSXPXXXXXXPXGPPPXXRXXHPPPXXXXXX 648
PP +PP P P P P P PPP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 649 XPXXS---XXSXXXXXXXXXXLPXPXXPPQXPPAXXXSXXXXPXPPPPTP 789
P S +P PP P+ P P+P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 28.3 bits (60), Expect = 1.4
Identities = 25/114 (21%), Positives = 28/114 (24%), Gaps = 3/114 (2%)
Frame = +2
Query: 467 APXSXPXXPXPPXXXPLXXAXXXRXPXPPSNPXPXXXXXXXXXPPXXXVXTTPPPXXXXX 646
AP + P P P P A P P + P PP PP
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 647 LLHXXPXXPXXXGXXXXXXSPXPXXXPK-XPPPXXXRTXXPXXPPPQ--PPPXP 799
P P P PP + P P P PP P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 27.9 bits (59), Expect = 1.8
Identities = 24/112 (21%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Frame = +2
Query: 461 PXAPXSXPXXPXPPXXXPLXXAXXXRXPXPPSNPXPXXXXXXXXXPPXXXVXTTPPPXXX 640
P + P P P P+ P P + P PP PP
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 641 XXLLHXXPXXPXXXGXXXXXXSPXPXXXPKXPPPXXXRTXXP-XXPPPQPPP 793
P P P P PP P PP PPP
Sbjct: 1165 SV---AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.2
Identities = 24/112 (21%), Positives = 24/112 (21%), Gaps = 1/112 (0%)
Frame = +1
Query: 481 PAXPSPPXXXPXXXGXXXPXPXPXXQSXPXXXXXXPXGPP-PXXRXXHPPPXXXXXXXPX 657
P P P P P P P PP P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 658 XSXXSXXXXXXXXXXLPXPXXPPQXPPAXXXSXXXXPXPPPPTPPXPXXXXP 813
S P PP P P P PT P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 25.4 bits (53), Expect = 9.9
Identities = 23/96 (23%), Positives = 24/96 (25%), Gaps = 4/96 (4%)
Frame = +2
Query: 524 AXXXRXPXPPSNPXPXXXXXXXXXPPXXXVXTTPPPXXXXXLLHXXPXXPXXXGXXXXXX 703
A R PPS P P P PP + P P
Sbjct: 958 ASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKL 1017
Query: 704 S----PXPXXXPKXPPPXXXRTXXPXXPPPQPPPXP 799
S P P PP T P P PP P
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP 1053
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 706 PXPXXPPQXPPAXXXSXXXXPXPPPPTP 789
P PP PP + P PPPP P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +3
Query: 468 PPXXPRXXLXPXXXPXXLRPXXXGXLPXXPIRPXXXPXXXXXXPPXXPXXPPPP 629
PP P + P P + + P P P PP P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP--PPPP 783
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 707 PXPXXXPKXPPPXXXRTXXPXXPPPQPPP 793
P P PPP PPP PPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect(2) = 0.11
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +1
Query: 493 SPPXXXPXXX-GXXXPXPXPXXQSXPXXXXXXPXGPPPXXRXXHPPP 630
SPP P P P P P P PPP PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 26.6 bits (56), Expect = 4.3
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 5/56 (8%)
Frame = +2
Query: 647 LLHXXPXXPXXXGXXXXXXSPXPXXXPKX-----PPPXXXRTXXPXXPPPQPPPXP 799
LL P P +P P P PPP PPP PPP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 23.4 bits (48), Expect(2) = 0.11
Identities = 10/29 (34%), Positives = 10/29 (34%)
Frame = +1
Query: 712 PXXPPQXPPAXXXSXXXXPXPPPPTPPXP 798
P PP PPA P P P P
Sbjct: 775 PPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.35
Identities = 19/76 (25%), Positives = 20/76 (26%)
Frame = +1
Query: 586 PXGPPPXXRXXHPPPXXXXXXXPXXSXXSXXXXXXXXXXLPXPXXPPQXPPAXXXSXXXX 765
P P P P P S S +P PP P A S
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 766 PXPPPPTPPXPXXXXP 813
P P PP P P
Sbjct: 188 PSLPSAVPPMPPKVPP 203
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +3
Query: 462 PXPPXXPRXXLXPXXXPXXLRPXXXGXLPXXPIR-PXXXPXXXXXXPPXXPXXPPPP 629
P P P P L P P P++ P P PP P PPPP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQ---PAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +1
Query: 712 PXXPPQXPPAXXXSXXXXPXPPPPTPPXPXXXXP 813
P P + PP+ P PP PP P P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.4 bits (53), Expect = 9.9
Identities = 23/92 (25%), Positives = 27/92 (29%)
Frame = +2
Query: 467 APXSXPXXPXPPXXXPLXXAXXXRXPXPPSNPXPXXXXXXXXXPPXXXVXTTPPPXXXXX 646
AP S P P P + R PP +P P + PPP
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP---IPSSLPPPAQPAA 179
Query: 647 LLHXXPXXPXXXGXXXXXXSPXPXXXPKXPPP 742
+ P P S P PK PPP
Sbjct: 180 PVKSPPSAP-------SLPSAVPPMPPKVPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.46
Identities = 19/80 (23%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Frame = +2
Query: 389 PXPXXXXXPXXXPXXXXXXXXXXXPX-APXSXPXXPXPPXXXPLXXAXXXRXPXPPSNPX 565
P P P P P AP + P P P PL P PP+ P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 566 PXXXXXXXXXPPXXXVXTTP 625
P P + P
Sbjct: 476 PPPAPAPAPAAPVASIAELP 495
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/118 (23%), Positives = 29/118 (24%), Gaps = 5/118 (4%)
Frame = +2
Query: 461 PXAPXSXPXXPXPPXXXPLXXAXXXRXPXPPSNPX---PXXXXXXXXXPPXXXVXTTPPP 631
P P S P P A PP+ P P TPP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 632 XXXXXLLHXXPXXPXXXGXXXXXXSPXPXXXPKXPPPXXXRTXXPXXPP--PQPPPXP 799
P P P P P PP P PP P PPP P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 707 PXPXXXPKXPPPXXXRTXXPXXPPPQPPP 793
P P P PP + PPP PPP
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.1 bits (57), Expect = 3.2
Identities = 25/107 (23%), Positives = 30/107 (28%), Gaps = 2/107 (1%)
Frame = +1
Query: 484 AXPSPPXXXPXXXGXXXPXPXPXXQSXPXXXXXXPXGPPPXXRXXHPP--PXXXXXXXPX 657
A +PP P G P P + P PP PP P P
Sbjct: 384 AVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT--PPSLPPSAPPSLPPSAPPSLPM 441
Query: 658 XSXXSXXXXXXXXXXLPXPXXPPQXPPAXXXSXXXXPXPPPPTPPXP 798
+ + P P P PP + P PPP P P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA----PAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +2
Query: 707 PXPXXXPKXPPPXXXRTXXPXXPPPQPPP 793
P P + PP + PPP PPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +1
Query: 712 PXXPPQXPPAXXXSXXXXPXPPPPTPPXPXXXXP 813
P PP PP+ S PP PP P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 25.4 bits (53), Expect = 9.9
Identities = 22/90 (24%), Positives = 24/90 (26%), Gaps = 4/90 (4%)
Frame = +1
Query: 535 PXPXPXXQSXPXXXXXXPXGPPPXXRXXHPPPXXXXXXXPXXSXXSXXXXXXXXXXLPXP 714
P P S P P P PPP P S +
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPI---PPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Query: 715 XXPPQXPPAXXXSXXXXPX----PPPPTPP 792
PP PP+ S PPPP PP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPP 317
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 704 SPXPXXXPKXPPPXXXRTXXPXXPPPQPPP 793
+P P P PP P PP PPP
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 713 PXXXPKXPPPXXXRTXXPXXPPPQPPP 793
P P PPP P PPP PPP
Sbjct: 6 PGNPPPPPPPPGFEP--PSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 703 LPXPXXPPQXPPAXXXSXXXXPXPPPP 783
LP PP PP P PPPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +1
Query: 721 PPQXPPAXXXSXXXXPXPPPPTPPXP 798
PP PP P PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 555 PIRPXXXPXXXXXXPPXXPXXPPPP 629
P P P PP P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 706 PXPXXPPQXPPAXXXSXXXXPXPPPPTPPXP 798
P P P A S PPPP PP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 712 PXXPPQXPPAXXXSXXXXPXPPPPTPP 792
P PP P P PPPPT P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLP 247
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 5.6
Identities = 27/115 (23%), Positives = 30/115 (26%)
Frame = -3
Query: 812 GXXXXGXGGVGGGGXGXXXXEXXXAGGXWGGXXGXGXXXXXXXXXXXXXXXXXGXXXXXX 633
G GG+ G GG +GG G G
Sbjct: 162 GLGGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG 221
Query: 632 XGGGWXXRXXGGGPXGXXXXXXGXDWXXGXGXGXXXPXXXGXXXGGEGXAGXXGG 468
GG+ GGGP G G G G G G G G G GG
Sbjct: 222 GHGGF-----GGGPGGFEGGPGG----FGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 25.4 bits (53), Expect = 9.9
Identities = 26/91 (28%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = -1
Query: 811 GXXXXGXGGLGGGGXGXXXXXAXXRGGFGXXXWXXG-XXXXXXPXXXRXGXXXMEXXXXX 635
G G GG GGG G GGFG G G E
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGP----GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 634 XXGG-GGXXGXXGGXXXXXXGXXXGRIGXXG 545
GG GG G GG G G G G
Sbjct: 240 FGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 7.5
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 321 LRSLISNLSNTCDLTPLPEWSCEQSAW 241
+RS+ L D+TP+ +W ++S W
Sbjct: 109 VRSIEQELEQLRDVTPINQWKRKRSLW 135
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 812 GXXXXGXGGVGGGGXGXXXXEXXXAGGXWGGXXG 711
G G GG GGG G GG GG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.143 0.507
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,536,448
Number of Sequences: 5004
Number of extensions: 21682
Number of successful extensions: 300
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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