Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_G24
(831 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 230 4e-60
AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 230 4e-60
U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 222 1e-57
BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. 219 1e-56
BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 213 5e-55
BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 213 5e-55
AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 213 5e-55
AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 213 5e-55
U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 213 9e-55
AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein. 195 1e-49
U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 138 2e-32
BC018953-1|AAH18953.2| 78|Homo sapiens SMARCD2 protein protein. 69 2e-11
AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein. 62 2e-09
BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing ... 31 5.1
AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens ... 31 5.1
>BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 476
Score = 230 bits (563), Expect = 4e-60
Identities = 108/160 (67%), Positives = 132/160 (82%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
HERE++ CD+YL+QIF + R+K +E+P RL ALL P+PI+INHVI+V+P +D K+TACY
Sbjct: 293 HEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDP-NDQKKTACY 351
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEVDDTLK QMN+FLLSTA+QQEI LD+KIHET++TINQLKT REF LSF++DPQ
Sbjct: 352 DIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQG 411
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
FI WL SQ RDLK+M+ GNPEEERRA+FY WA E
Sbjct: 412 FINDWLQSQCRDLKTMT-DVVGNPEEERRAEFYFQPWAQE 450
Score = 74.1 bits (174), Expect = 6e-13
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG N R T+L Y P QFK G+HTQTRPVI+ ALWQY+
Sbjct: 225 TQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYI 284
Query: 626 KTH 618
KTH
Sbjct: 285 KTH 287
>AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related,
matrix-associated, actin-dependent regulator of
chromatin D1 protein.
Length = 453
Score = 230 bits (563), Expect = 4e-60
Identities = 108/160 (67%), Positives = 132/160 (82%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
HERE++ CD+YL+QIF + R+K +E+P RL ALL P+PI+INHVI+V+P +D K+TACY
Sbjct: 270 HEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDP-NDQKKTACY 328
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEVDDTLK QMN+FLLSTA+QQEI LD+KIHET++TINQLKT REF LSF++DPQ
Sbjct: 329 DIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQG 388
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
FI WL SQ RDLK+M+ GNPEEERRA+FY WA E
Sbjct: 389 FINDWLQSQCRDLKTMT-DVVGNPEEERRAEFYFQPWAQE 427
Score = 74.1 bits (174), Expect = 6e-13
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG N R T+L Y P QFK G+HTQTRPVI+ ALWQY+
Sbjct: 202 TQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYI 261
Query: 626 KTH 618
KTH
Sbjct: 262 KTH 264
>U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 475
Score = 222 bits (543), Expect = 1e-57
Identities = 106/160 (66%), Positives = 125/160 (78%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
HEREYI C+RY QIF R++ +E+P +L LL PDPIVINHVI+V+P +D K+TACY
Sbjct: 292 HEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDP-NDQKKTACY 350
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEVDD LKAQM+NFL ST NQQEI LD KIHET+++INQLKT R+F LSFS DPQ
Sbjct: 351 DIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQD 410
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
FIQ+WL SQ RDLK ++ +GNPEEERRA FY WA E
Sbjct: 411 FIQEWLRSQRRDLKIIT-DVTGNPEEERRAAFYHQPWAQE 449
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG N + T+L + P Q+K GVHTQTR I+ ALW Y+
Sbjct: 224 TQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYI 283
Query: 626 K 624
K
Sbjct: 284 K 284
>BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein.
Length = 531
Score = 219 bits (534), Expect = 1e-56
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
HEREYI C+RY QIF R+ +++P +L LL PDPIVINHVI+V+P +D K+TACY
Sbjct: 348 HEREYINCNRYFRQIFSCGRLSFSKIPMKLAGLLQHPDPIVINHVISVDP-NDQKKTACY 406
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEVDD LKAQM+NFL ST NQQEI LD KIHET+++INQLKT R+F LSFS DPQ
Sbjct: 407 DIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQD 466
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
FIQ+WL SQ RDLK ++ GNPEEERRA FY WA E
Sbjct: 467 FIQEWLRSQRRDLKIIT-DVIGNPEEERRAAFYHQPWAQE 505
Score = 55.6 bits (128), Expect = 2e-07
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG N + T+L + P Q+K GVHTQTR I ALW Y+
Sbjct: 280 TQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAITQALWLYI 339
Query: 626 K 624
K
Sbjct: 340 K 340
>BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 213 bits (521), Expect = 5e-55
Identities = 102/160 (63%), Positives = 128/160 (80%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
H++EYI D+Y +QIF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACY
Sbjct: 287 HDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACY 345
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEV++ LK QM++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+
Sbjct: 346 DIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKG 405
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
++Q L SQSRDLK M+ +GNPEEERRA+FY W+ E
Sbjct: 406 YVQDLLRSQSRDLKVMT-DVAGNPEEERRAEFYHQPWSQE 444
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 219 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 278
Query: 626 KTH 618
KT+
Sbjct: 279 KTN 281
>BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 213 bits (521), Expect = 5e-55
Identities = 102/160 (63%), Positives = 128/160 (80%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
H++EYI D+Y +QIF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACY
Sbjct: 287 HDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACY 345
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEV++ LK QM++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+
Sbjct: 346 DIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKG 405
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
++Q L SQSRDLK M+ +GNPEEERRA+FY W+ E
Sbjct: 406 YVQDLLRSQSRDLKVMT-DVAGNPEEERRAEFYHQPWSQE 444
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 219 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 278
Query: 626 KTH 618
KT+
Sbjct: 279 KTN 281
>AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 1 protein.
Length = 470
Score = 213 bits (521), Expect = 5e-55
Identities = 102/160 (63%), Positives = 128/160 (80%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
H++EYI D+Y +QIF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACY
Sbjct: 287 HDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACY 345
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEV++ LK QM++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+
Sbjct: 346 DIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKG 405
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
++Q L SQSRDLK M+ +GNPEEERRA+FY W+ E
Sbjct: 406 YVQDLLRSQSRDLKVMT-DVAGNPEEERRAEFYHQPWSQE 444
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 219 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 278
Query: 626 KTH 618
KT+
Sbjct: 279 KTN 281
>AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 2 protein.
Length = 483
Score = 213 bits (521), Expect = 5e-55
Identities = 102/160 (63%), Positives = 128/160 (80%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
H++EYI D+Y +QIF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACY
Sbjct: 300 HDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACY 358
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEV++ LK QM++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+
Sbjct: 359 DIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKG 418
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
++Q L SQSRDLK M+ +GNPEEERRA+FY W+ E
Sbjct: 419 YVQDLLRSQSRDLKVMT-DVAGNPEEERRAEFYHQPWSQE 457
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 232 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 291
Query: 626 KTH 618
KT+
Sbjct: 292 KTN 294
>U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 469
Score = 213 bits (519), Expect = 9e-55
Identities = 102/160 (63%), Positives = 128/160 (80%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
H++EYI D+Y +QIF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACY
Sbjct: 286 HDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACY 344
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEV++ LK QM++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+
Sbjct: 345 DIDVEVEEPLKGQMSSFLLSTANQQEISPLDSKIHETIESINQLKIQRDFMLSFSRDPKG 404
Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
++Q L SQSRDLK M+ +GNPEEERRA+FY W+ E
Sbjct: 405 YVQDLLRSQSRDLKVMT-DVAGNPEEERRAEFYHQPWSQE 443
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 218 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 277
Query: 626 KTH 618
KT+
Sbjct: 278 KTN 280
>AC021097-1|AAS00380.1| 170|Homo sapiens unknown protein.
Length = 170
Score = 195 bits (476), Expect = 1e-49
Identities = 95/146 (65%), Positives = 117/146 (80%)
Frame = -1
Query: 558 IFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACYDIDVEVDDTLKAQM 379
IF PR+K +E+P RL ALL PDPIVINHVI+V+P D K+TACYDIDVEV++ LK QM
Sbjct: 1 IFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPS-DQKKTACYDIDVEVEEPLKGQM 59
Query: 378 NNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLK 199
++FLLSTANQQEI LDSKIHET+++INQLK R+F LSFS+DP+ ++Q L SQSRDLK
Sbjct: 60 SSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLK 119
Query: 198 SMSGGASGNPEEERRAQFYCAGWAGE 121
M+ +GNPEEERRA+FY W+ E
Sbjct: 120 VMT-DVAGNPEEERRAEFYHQPWSQE 144
>U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 435
Score = 138 bits (335), Expect = 2e-32
Identities = 68/129 (52%), Positives = 91/129 (70%)
Frame = -1
Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
HERE++ CD+YL+QIF R+K +E+P RL ALL P+PI+INHVI+V+P +D K+TACY
Sbjct: 293 HEREFVICDKYLQQIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDP-NDQKKTACY 351
Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
DIDVEVDDTLK QMN+FLLSTA+QQEI LD+K D + + R F Q+
Sbjct: 352 DIDVEVDDTLKTQMNSFLLSTASQQEIATLDNK--TMTDVVGNPEEERRAEFYFQPWAQE 409
Query: 240 FIQKWLVSQ 214
+ ++ S+
Sbjct: 410 AVCRYFYSK 418
Score = 74.1 bits (174), Expect = 6e-13
Identities = 34/63 (53%), Positives = 38/63 (60%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG N R T+L Y P QFK G+HTQTRPVI+ ALWQY+
Sbjct: 225 TQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYI 284
Query: 626 KTH 618
KTH
Sbjct: 285 KTH 287
Score = 35.5 bits (78), Expect = 0.24
Identities = 24/63 (38%), Positives = 32/63 (50%)
Frame = -1
Query: 309 VDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGW 130
V+ + LKT FL + Q+ + D K+M+ GNPEEERRA+FY W
Sbjct: 355 VEVDDTLKTQMNSFLLSTASQQEIA-------TLDNKTMTD-VVGNPEEERRAEFYFQPW 406
Query: 129 AGE 121
A E
Sbjct: 407 AQE 409
>BC018953-1|AAH18953.2| 78|Homo sapiens SMARCD2 protein protein.
Length = 78
Score = 69.3 bits (162), Expect = 2e-11
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = -1
Query: 279 REFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
R+F LSFS DPQ FIQ+WL SQ RDLK ++ GNPEEERRA FY WA E
Sbjct: 1 RDFMLSFSTDPQDFIQEWLRSQRRDLKIIT-DVIGNPEEERRAAFYHQPWAQE 52
>AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein.
Length = 300
Score = 62.5 bits (145), Expect = 2e-09
Identities = 31/63 (49%), Positives = 36/63 (57%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + R T+L Y P QFK G+HTQ+R IV ALWQYV
Sbjct: 219 TQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYV 278
Query: 626 KTH 618
KT+
Sbjct: 279 KTN 281
>BC001108-1|AAH01108.1| 290|Homo sapiens PIH1 domain containing 1
protein.
Length = 290
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -1
Query: 444 DAKQTAC--YDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREF 271
DAK C YD+ V D + Q ++FL +GL+ K + ++ ++ NR F
Sbjct: 111 DAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQLNPEWRMMKNRPF 170
Query: 270 FLSFSKDPQQFIQKWLVSQSRDLKSMS-GGASGNPEE 163
S S+ + Q+ + + DL + + G A PE+
Sbjct: 171 MGSISQQNIRSEQRPRIQELGDLYTPAPGRAESGPEK 207
>AK000650-1|BAA91307.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ20643 fis, clone KAT02633. ).
Length = 290
Score = 31.1 bits (67), Expect = 5.1
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -1
Query: 444 DAKQTAC--YDIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREF 271
DAK C YD+ V D + Q ++FL +GL+ K + ++ ++ NR F
Sbjct: 111 DAKGQGCTAYDVAVNSDFYRRMQNSDFLRELVITIAREGLEDKYNLQLNPEWRMMKNRPF 170
Query: 270 FLSFSKDPQQFIQKWLVSQSRDLKSMS-GGASGNPEE 163
S S+ + Q+ + + DL + + G A PE+
Sbjct: 171 MGSISQQNIRSEQRPRIQELGDLYTPAPGRAESGPEK 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,005,314
Number of Sequences: 237096
Number of extensions: 1370949
Number of successful extensions: 4718
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4694
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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