Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_G24
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p pro...   243   3e-64
AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA...   243   3e-64
AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma assoc...   241   1e-63

>AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p
           protein.
          Length = 515

 Score =  243 bits (594), Expect = 3e-64
 Identities = 114/160 (71%), Positives = 132/160 (82%)
 Frame = -1

Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
           HEREYI CD+YLEQIF   R+K AE+P RL  LLH PDPIVINH I  E   + KQTACY
Sbjct: 333 HEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFI--ESGAENKQTACY 390

Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
           DIDVEVDDTLK QMN+FL+STA+QQEIQGLD+KIHETVDTINQ+KTNREFFLSF+KDPQ 
Sbjct: 391 DIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQM 450

Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
           FI +W++S++RDLK M+   +GNPEEERRA+FY   W  E
Sbjct: 451 FIHRWIISETRDLKLMT-DVAGNPEEERRAEFYYQPWTHE 489



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 37/63 (58%), Positives = 40/63 (63%)
 Frame = -2

Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
           T  T G  VKRPG  N R TIL    Y PLQFK         GVHTQTRPVI++ALWQY+
Sbjct: 265 TQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYI 324

Query: 626 KTH 618
           KTH
Sbjct: 325 KTH 327


>AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA
           protein.
          Length = 515

 Score =  243 bits (594), Expect = 3e-64
 Identities = 114/160 (71%), Positives = 132/160 (82%)
 Frame = -1

Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
           HEREYI CD+YLEQIF   R+K AE+P RL  LLH PDPIVINH I  E   + KQTACY
Sbjct: 333 HEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFI--ESGAENKQTACY 390

Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
           DIDVEVDDTLK QMN+FL+STA+QQEIQGLD+KIHETVDTINQ+KTNREFFLSF+KDPQ 
Sbjct: 391 DIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQM 450

Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
           FI +W++S++RDLK M+   +GNPEEERRA+FY   W  E
Sbjct: 451 FIHRWIISETRDLKLMT-DVAGNPEEERRAEFYYQPWTHE 489



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 37/63 (58%), Positives = 40/63 (63%)
 Frame = -2

Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
           T  T G  VKRPG  N R TIL    Y PLQFK         GVHTQTRPVI++ALWQY+
Sbjct: 265 TQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYI 324

Query: 626 KTH 618
           KTH
Sbjct: 325 KTH 327


>AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma
           associated protein 60 kDa protein.
          Length = 515

 Score =  241 bits (589), Expect = 1e-63
 Identities = 113/160 (70%), Positives = 131/160 (81%)
 Frame = -1

Query: 600 HEREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACY 421
           HEREYI CD+YLEQIF   R+K AE+P RL  LLH PDPIVINH I  E   + KQTACY
Sbjct: 333 HEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFI--ESGAENKQTACY 390

Query: 420 DIDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQ 241
           DIDVEVDDTLK QMN+FL+STA+QQEIQGLD+KIHETVDTINQ+ TNREFFLSF+KDPQ 
Sbjct: 391 DIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMNTNREFFLSFAKDPQM 450

Query: 240 FIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAGWAGE 121
           FI +W++S++RDLK M+   +GNPEEERRA+FY   W  E
Sbjct: 451 FIHRWIISETRDLKLMT-DVAGNPEEERRAEFYYQPWTHE 489



 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 37/63 (58%), Positives = 40/63 (63%)
 Frame = -2

Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
           T  T G  VKRPG  N R TIL    Y PLQFK         GVHTQTRPVI++ALWQY+
Sbjct: 265 TQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYI 324

Query: 626 KTH 618
           KTH
Sbjct: 325 KTH 327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,671,970
Number of Sequences: 53049
Number of extensions: 395375
Number of successful extensions: 1670
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)