Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_G24
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical pr... 148 4e-36
AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical ... 131 7e-31
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 31 0.77
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 31 0.77
Z81110-1|CAB03258.2| 322|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF370362-1|AAK52515.1| 322|Caenorhabditis elegans putative tran... 31 1.0
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 30 1.8
AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical ... 29 5.4
AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical ... 29 5.4
Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical pr... 28 9.4
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 28 9.4
U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associa... 28 9.4
AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein. 28 9.4
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 28 9.4
>Z47357-5|CAA87424.1| 446|Caenorhabditis elegans Hypothetical
protein ZK1128.5 protein.
Length = 446
Score = 148 bits (359), Expect = 4e-36
Identities = 71/152 (46%), Positives = 102/152 (67%)
Frame = -1
Query: 597 EREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACYD 418
+R+ I D +LEQ FG +++ E+P RL LL PDP+V+NH+I K +ACYD
Sbjct: 263 DRDTINNDLFLEQCFGVSKMRFMEIPQRLHQLLQQPDPLVLNHIIQRPDDGQDKTSACYD 322
Query: 417 IDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQF 238
IDVE++D +K QM NF+ + N +IQ LD KI + VD IN++K R+FFL FS +P F
Sbjct: 323 IDVELEDPVKQQMANFVHNQTNANDIQLLDQKIFDLVDQINEMKLRRDFFLRFSNEPSGF 382
Query: 237 IQKWLVSQSRDLKSMSGGASGNPEEERRAQFY 142
I+KW+VSQ+ DLK+++ +SG+ E +R A Y
Sbjct: 383 IKKWVVSQNSDLKTLT-ESSGDGESDRYATTY 413
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/63 (44%), Positives = 35/63 (55%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKRPG + TIL Y P++FK G+ +TRP I+ ALWQY+
Sbjct: 194 TNETDGFQVKRPGDRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAETRPRIIEALWQYI 253
Query: 626 KTH 618
KTH
Sbjct: 254 KTH 256
>AF000265-9|AAB52943.2| 449|Caenorhabditis elegans Hypothetical
protein C18E3.2 protein.
Length = 449
Score = 131 bits (316), Expect = 7e-31
Identities = 63/152 (41%), Positives = 95/152 (62%)
Frame = -1
Query: 597 EREYIACDRYLEQIFGAPRVKLAEVPARLGALLHAPDPIVINHVIAVEPPHDAKQTACYD 418
ER+ I CD +L Q FG R++ EVP +L LL DP+ NH+I + + CYD
Sbjct: 266 ERDIINCDTFLSQCFGVNRMRFMEVPNKLHQLLQQTDPLEFNHIIQRPKEGQEQVSTCYD 325
Query: 417 IDVEVDDTLKAQMNNFLLSTANQQEIQGLDSKIHETVDTINQLKTNREFFLSFSKDPQQF 238
IDVE++D +K M+ F+ S +IQ LD K ++ ++ IN+LKT R+F+ F +P +F
Sbjct: 326 IDVEMEDPVKQFMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFYARFYTEPAEF 385
Query: 237 IQKWLVSQSRDLKSMSGGASGNPEEERRAQFY 142
I+ W++SQ+ DLK+M+ SG+ E ER A+ Y
Sbjct: 386 IKSWVMSQNSDLKTMN-ELSGDLEAERFAESY 416
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/63 (41%), Positives = 32/63 (50%)
Frame = -2
Query: 806 TXXTXGXXVKRPGXXNXRXTILXXXXYXPLQFKXTSGWRGXXGVHTQTRPVIVNALWQYV 627
T T G VKR G + IL P +FK G+ T+TRP I+ ALWQY+
Sbjct: 197 TNETDGFQVKRAGDRPVKCRILLLLDNHPAKFKLHPRLAKVLGIATETRPKIIEALWQYI 256
Query: 626 KTH 618
KTH
Sbjct: 257 KTH 259
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 333 LDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGASGNPEEER 157
LD K+ T++ I +L E F +DP+ + S+ LKS+ GA+ ER
Sbjct: 715 LDEKLRRTIEKIGELLAEHESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 333 LDSKIHETVDTINQLKTNREFFLSFSKDPQQFIQKWLVSQSRDLKSMSGGASGNPEEER 157
LD K+ T++ I +L E F +DP+ + S+ LKS+ GA+ ER
Sbjct: 715 LDEKLRRTIEKIGELLAEHESFQESLRDPEFHTAEAFRKISQLLKSILSGANSEEMLER 773
>Z81110-1|CAB03258.2| 322|Caenorhabditis elegans Hypothetical
protein T01D3.2 protein.
Length = 322
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 519 ARLGALLHAPDPIVINHVIAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEI 340
A A+ +P V+ I + P + + ACY + V T+ N+F++ T+ I
Sbjct: 168 ANKDAVRASPGYKVLRLEITMGPNTNTRMIACYPMPTPVLSTVTIPSNSFVIITSIDLHI 227
Query: 339 QGLDSKIHETVD 304
D K H+ ++
Sbjct: 228 TFADEKAHQLLN 239
>AF370362-1|AAK52515.1| 322|Caenorhabditis elegans putative
transcription factor T01D3.2protein.
Length = 322
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 519 ARLGALLHAPDPIVINHVIAVEPPHDAKQTACYDIDVEVDDTLKAQMNNFLLSTANQQEI 340
A A+ +P V+ I + P + + ACY + V T+ N+F++ T+ I
Sbjct: 168 ANKDAVRASPGYKVLRLEITMGPNTNTRMIACYPMPTPVLSTVTIPSNSFVIITSIDLHI 227
Query: 339 QGLDSKIHETVD 304
D K H+ ++
Sbjct: 228 TFADEKAHQLLN 239
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 226 PLLDELLRILAEAQEELAVCFQLVDGVHSL 315
P +E+ IL Q++L QL+DG+HSL
Sbjct: 432 PKFEEVKTILVTFQQDLGSLRQLIDGIHSL 461
>AF068713-4|AAC17795.2| 398|Caenorhabditis elegans Hypothetical
protein T24A6.8 protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 358 RQPAGDPRPRLQDPRDCGHHQPVENKPRVLLELQQ 254
RQP G RP + +P C H P R+ ++ +
Sbjct: 262 RQPDGTQRPGVNEPHYCAHTVPFGPMKRIKIQFNE 296
>AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical
protein T20B6.2 protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 223 EPLLDELLRILAEAQEELAVCFQLVDGVHSL 315
+P +E+ IL Q+ L QL++G+HSL
Sbjct: 188 DPKFEEVKTILVTFQQHLVSLKQLIEGIHSL 218
>Z73103-4|CAA97426.1| 585|Caenorhabditis elegans Hypothetical
protein C08F8.5 protein.
Length = 585
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 255 KDPQQFIQKWLVSQSRDLKSMSGGASGNPEEERRAQFYCAG 133
KD +F++ W+ +R+LKS++ A N E E + G
Sbjct: 138 KDVNKFLKHWIRGSNRELKSLAFRAPMNMEIEHAIETILKG 178
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 354
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 379 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 428
>U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform a protein.
Length = 696
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 354
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 396 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 445
>AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein.
Length = 696
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 354
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 396 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 445
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 205 VSGLTDEPLLDELLRILAEAQEELAVCFQLVDGVHSLVDLGVEALDLLLV 354
+SG E LL I E + VC Q G+ L+++ + + DL+L+
Sbjct: 379 LSGTGSEVTKAVLLNICLEKRNAQLVCGQRGQGLDLLMEMSINSRDLMLI 428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,995,876
Number of Sequences: 27780
Number of extensions: 186970
Number of successful extensions: 669
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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