Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_G23
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.                 33   1.4  
AK096734-1|BAC04853.1|  340|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AB029009-1|BAA83038.1|  902|Homo sapiens KIAA1086 protein protein.     32   3.3  
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     32   3.3  

>AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.
          Length = 924

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/51 (37%), Positives = 20/51 (39%)
 Frame = +2

Query: 362 SVPXLPRXXPTQPAASGRDTPXXGXSXFLSXQPAPXPXMAPXXTYPPQVAP 514
           SVP LP   P  P  S R  P  G     S  PAP    +P    PP   P
Sbjct: 24  SVPLLPMPLPPPPPPSCRG-PGGGRISIFSLSPAPHTRSSPSSFSPPTAGP 73


>AK096734-1|BAC04853.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39415 fis, clone PLACE6016160. ).
          Length = 340

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/51 (37%), Positives = 20/51 (39%)
 Frame = +2

Query: 362 SVPXLPRXXPTQPAASGRDTPXXGXSXFLSXQPAPXPXMAPXXTYPPQVAP 514
           SVP LP   P  P  S R  P  G     S  PAP    +P    PP   P
Sbjct: 24  SVPLLPMPLPPPPPPSCRG-PGGGRISIFSLSPAPHTRSSPSSFSPPTAGP 73


>AB029009-1|BAA83038.1|  902|Homo sapiens KIAA1086 protein protein.
          Length = 902

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 20/73 (27%), Positives = 25/73 (34%)
 Frame = +2

Query: 377 PRXXPTQPAASGRDTPXXGXSXFLSXQPAPXPXMAPXXTYPPQVAP*PSXXGXAXTYPXR 556
           P   PT  A +    P    S + +  P   P   P    PPQ  P P     + + P  
Sbjct: 152 PSYNPTCTAYTAPSYPNYDASVYSAASPFYPPAQPPPPPGPPQQLPPPPAPAGSGSSPRA 211

Query: 557 XRTGRLPXFXPRP 595
                LP   PRP
Sbjct: 212 DSKPPLPSKLPRP 224


>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 22/69 (31%), Positives = 23/69 (33%)
 Frame = +2

Query: 398 PAASGRDTPXXGXSXFLSXQPAPXPXMAPXXTYPPQVAP*PSXXGXAXTYPXRXRTGRLP 577
           P +SG D          S  PAP P   P    PP   P P        YP       LP
Sbjct: 578 PCSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLP 637

Query: 578 XFXPRPXXP 604
              PRP  P
Sbjct: 638 ---PRPDGP 643


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,243,776
Number of Sequences: 237096
Number of extensions: 1403507
Number of successful extensions: 9675
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9179
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)