Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_G05
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129...    31   1.2  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    31   1.2  
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527...    30   2.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.0  
03_01_0515 - 3864796-3865425                                           28   8.7  

>10_08_0630 -
           19410852-19411235,19411370-19412257,19412440-19412941,
           19413662-19414135,19414982-19415040,19415468-19415629
          Length = 822

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 781 PIPTPXPSXPXXXSWXXMHPXPPXPXVTGSXRSXPSP 891
           P P P PS P   +     P PP P    +  S PSP
Sbjct: 429 PQPPPPPSHPTPITSVAPAPPPPPPAAAAAAASQPSP 465


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
 Frame = +1

Query: 724 PGHPXXPLR--PXXXXMGXXXPIPTPXPSXPXXXSWXXMHPXPPXPXVTGSXRSXPSP 891
           P  P  PL+  P         P P   P  P   S     P PP P + GS ++ P P
Sbjct: 572 PQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPP 629


>04_03_0747 -
           19251617-19251781,19252377-19252502,19252606-19252716,
           19252931-19253679,19254034-19254167,19254595-19254740,
           19255166-19255336,19255977-19256828
          Length = 817

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = +1

Query: 715 HXNPGHPXXPLRPXXXXMGXXXPIPTPXPSXPXXXSWXXMHP-XPPXPXVTGSXR-SXPS 888
           H +P  P  P  P    M    P PTP P+ P    W    P   P P  +   R + PS
Sbjct: 125 HISPPPPPPP--PARTPMPTPTPTPTPTPTRPPVPVWAAPLPARTPTPTPSAPPRAAAPS 182

Query: 889 P 891
           P
Sbjct: 183 P 183


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 5/86 (5%)
 Frame = +1

Query: 649 PHXXPXSXXRXPXR*QSFSLSXHXNPGHPXXPLRPXXXXMGXXXPI--PTPXPSXPXXXS 822
           P   P S  R P      + S    P  P  PL P     G   P   P P P  P   S
Sbjct: 668 PPPPPRSSSRTPT---GAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRS 724

Query: 823 WXXMHPXPPXP---XVTGSXRSXPSP 891
                P PP P       + R+ P+P
Sbjct: 725 NGPSAPAPPLPPPLPAAANKRNPPAP 750


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 781 PIPTPXPSXPXXXSWXXMHPXPPXPXVTGSXRSXPSP 891
           P P+   S P   +   M P PP P VT S    P P
Sbjct: 53  PPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,358,785
Number of Sequences: 37544
Number of extensions: 185379
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)