Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_G04
         (936 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   1.3  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   4.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 318 SLISNLSNTCDLTPLPEWSCEQSAWWGACGRVL 220
           SL +N   +  LTP P W+  ++   GACG  +
Sbjct: 98  SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/31 (32%), Positives = 11/31 (35%)
 Frame = +3

Query: 597 PPRPXPXXPTAAPXPLXXPXPXXXXXXXXPR 689
           PP   P  P  +P PL    P        PR
Sbjct: 437 PPSSNPVSPVPSPDPLDLAIPVRETLILPPR 467


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 14/58 (24%), Positives = 15/58 (25%)
 Frame = +3

Query: 522 PXPXPXPXXXFXPXXPPPXXXXPPLPPRPXPXXPTAAPXPLXXPXPXXXXXXXXPRXP 695
           P P P            P    P   P+P P  P     P   P          PR P
Sbjct: 107 PQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPP 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.145    0.510 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,397
Number of Sequences: 438
Number of extensions: 6356
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)