Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F23
         (871 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        31   4.1  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     31   4.1  
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.     31   7.2  
AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.     25   8.5  

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 17/59 (28%), Positives = 17/59 (28%)
 Frame = +3

Query: 690 PPXPAXXXXXXXWXXXPXXPXSPXXXXXPLXXXPPXXXPPPPXHXPXXRXPXXPXLXLP 866
           PP PA           P  P  P     P    P    PPPP   P    P  P    P
Sbjct: 113 PPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 171


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 17/59 (28%), Positives = 17/59 (28%)
 Frame = +3

Query: 690 PPXPAXXXXXXXWXXXPXXPXSPXXXXXPLXXXPPXXXPPPPXHXPXXRXPXXPXLXLP 866
           PP PA           P  P  P     P    P    PPPP   P    P  P    P
Sbjct: 658 PPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSP 716


>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
          Length = 1315

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 16/57 (28%), Positives = 16/57 (28%)
 Frame = +2

Query: 692 PXPXXGXXLXPXXXXXXXPXXXXXXXXXPXXGXPXXXPPPPXTXPXXXXXPXXXFXP 862
           P P  G  L P       P         P  G P   PPPP   P     P     P
Sbjct: 520 PKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEP 576


>AB051514-1|BAB21818.1| 1130|Homo sapiens KIAA1727 protein protein.
          Length = 1130

 Score = 25.0 bits (52), Expect(2) = 8.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 790 PPXXXPPPPNTPP 828
           PP   PPPP +PP
Sbjct: 21  PPPPPPPPPPSPP 33



 Score = 23.8 bits (49), Expect(2) = 8.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 805 PPPPNTPPXXGXP 843
           PPPP  PP  G P
Sbjct: 45  PPPPPPPPLPGEP 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,344,919
Number of Sequences: 237096
Number of extensions: 956355
Number of successful extensions: 9152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6752
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)