Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F21
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-2|CAC51076.2|  496|Caenorhabditis elegans Hypothetical ...    33   0.32 
AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical ...    33   0.32 
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc...    30   1.7  
U21320-2|ABC71824.1|  973|Caenorhabditis elegans O-linked glcnac...    30   1.7  
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac...    30   1.7  
Z92849-6|CAB07429.2|  306|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81146-2|CAB03526.1|  340|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF022979-3|AAB69902.2|  198|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z69385-7|CAA93429.2|  508|Caenorhabditis elegans Hypothetical pr...    29   5.2  
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    28   6.8  

>AL132948-2|CAC51076.2|  496|Caenorhabditis elegans Hypothetical
           protein Y39B6A.2 protein.
          Length = 496

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -2

Query: 469 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 323
           + K   +  A +  + A++IDP  V+G   R       G FKKA+ D++
Sbjct: 72  YLKKELYGSALEDADNAIAIDPSYVKGFYRRATANMALGRFKKALTDYQ 120


>AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical
           protein R09E12.3 protein.
          Length = 320

 Score = 32.7 bits (71), Expect = 0.32
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 481 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFET 320
           +G E+FK G +  A +  N+A+  DP N      R A       F++A++D +T
Sbjct: 146 KGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDT 199



 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 222 TEAQKAYEDCLAIIPFHEEAQNSL 151
           ++AQ+AYED L + P +EEA+  +
Sbjct: 225 SKAQRAYEDALQVDPSNEEAREGV 248


>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
           transferase protein.
          Length = 1151

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/73 (21%), Positives = 35/73 (47%)
 Frame = -2

Query: 538 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 359
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 488 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 545

Query: 358 SGTFKKAIEDFET 320
           +G   +AI+ + T
Sbjct: 546 AGNMAEAIQSYST 558



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 255 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 139
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 403 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 441


>U21320-2|ABC71824.1|  973|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform b protein.
          Length = 973

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/73 (21%), Positives = 35/73 (47%)
 Frame = -2

Query: 538 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 359
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 310 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 367

Query: 358 SGTFKKAIEDFET 320
           +G   +AI+ + T
Sbjct: 368 AGNMAEAIQSYST 380



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 255 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 139
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 225 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 263


>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform a protein.
          Length = 1151

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/73 (21%), Positives = 35/73 (47%)
 Frame = -2

Query: 538 YADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 359
           Y + +R A     A+ ++   ++    G  S A  C N+A+ I+P   +      +++ +
Sbjct: 488 YKEAIRIAPTFADAYSNMGNTLKEM--GDSSAAIACYNRAIQINPAFADAHSNLASIHKD 545

Query: 358 SGTFKKAIEDFET 320
           +G   +AI+ + T
Sbjct: 546 AGNMAEAIQSYST 558



 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -3

Query: 255 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLK 139
           L  + +++  + EA++ Y   L + P H ++QN+L  +K
Sbjct: 403 LANALKEKGSVVEAEQMYMKALELCPTHADSQNNLANIK 441


>Z92849-6|CAB07429.2|  306|Caenorhabditis elegans Hypothetical
           protein H12D21.7 protein.
          Length = 306

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 183 IPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSY 61
           IPF+E A+N +D+L ++TT      EP     P      S+
Sbjct: 179 IPFNEFAENKVDYLDARTTPQFTGEEPLNKTFPDTKATGSH 219


>Z81146-2|CAB03526.1|  340|Caenorhabditis elegans Hypothetical
           protein K10D11.2 protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -3

Query: 672 MKPYWRRAQASIIPTAFNSSLNILALPTCTAQISHI*EEDSLHRNTQMNYAK 517
           +KP +  A ++  PT+F   +N L  PT  ++ S + E  ++   T+  + K
Sbjct: 106 VKPKFTIAVSNNAPTSFGFQINWLPFPTTVSEYSDVTERATVLNATETTFTK 157


>AF022979-3|AAB69902.2|  198|Caenorhabditis elegans Hypothetical
           protein T02B11.4 protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -2

Query: 520 QAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKK 341
           QA  +K   ++V  G+  + A        C+   L   P + + ++A+G     S +  K
Sbjct: 22  QANRAKVCQKAVNLGVTFYTAKELEPILACIEPTLYATPEDTDAIIAKGKSCVISNSMSK 81

Query: 340 AI 335
           AI
Sbjct: 82  AI 83


>Z69385-7|CAA93429.2|  508|Caenorhabditis elegans Hypothetical
           protein ZK593.8 protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -2

Query: 445 EAFQCLNKALSIDPRNVEGLVAR 377
           EA QC  KAL+ DP N E LV R
Sbjct: 199 EADQCYVKALAYDPGNSEALVLR 221


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 463 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 323
           +AG  SEA    N+ L+ DP + + L  R   +     +  AIED++
Sbjct: 303 EAGHISEAIAECNEILNDDPSDADILCERAEAHILDEDYDSAIEDYQ 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,881,372
Number of Sequences: 27780
Number of extensions: 342611
Number of successful extensions: 905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)