Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F16
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0407 + 23205895-23206255,23206482-23206690                       32   0.66 
10_08_0029 + 14270945-14271364,14271449-14272486                       28   8.1  

>11_06_0407 + 23205895-23206255,23206482-23206690
          Length = 189

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 269 G*WSEVTSIREVGDEAPERRGWRAA---AXLHATXERRRRTXXXXAHXRRRL 415
           G WSEV SI     +A   RGW+ A       AT + RR      +H RR L
Sbjct: 8   GWWSEVASIAMANGDAVASRGWKEAWRHRGGEATRQWRRGVGELGSHFRRGL 59


>10_08_0029 + 14270945-14271364,14271449-14272486
          Length = 485

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 242 HALCSHDHSG*WSEVTSIREVGDEAPERRGWRAAAXLHATXERRRR 379
           HAL   D SG         +VG+ AP RRG R++  + A+  R RR
Sbjct: 240 HALQEMDRSGEEQAKIVEVDVGEPAPPRRG-RSSCSVAASESRERR 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,314,256
Number of Sequences: 37544
Number of extensions: 150798
Number of successful extensions: 574
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)