Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F16
         (843 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    31   6.9  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    31   6.9  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    31   6.9  
DQ854815-1|ABI75145.1|  112|Homo sapiens hyperpolarization-activ...    30   9.1  
AJ133727-1|CAB42630.1|  889|Homo sapiens hyperpolarization-activ...    30   9.1  
AJ012582-1|CAB42602.1|  889|Homo sapiens hyperpolarization-activ...    30   9.1  
AC005559-2|AAC33280.2|  528|Homo sapiens hyperpolarization activ...    30   9.1  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 17/54 (31%), Positives = 18/54 (33%)
 Frame = +1

Query: 574 PXASRXXXSXGAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGPXXSSXPS 735
           P A       G  PG    P   P PPP+        P    SP  P   S PS
Sbjct: 301 PPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 17/54 (31%), Positives = 18/54 (33%)
 Frame = +1

Query: 574 PXASRXXXSXGAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGPXXSSXPS 735
           P A       G  PG    P   P PPP+        P    SP  P   S PS
Sbjct: 301 PPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 17/54 (31%), Positives = 18/54 (33%)
 Frame = +1

Query: 574 PXASRXXXSXGAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGPXXSSXPS 735
           P A       G  PG    P   P PPP+        P    SP  P   S PS
Sbjct: 301 PPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS 354


>DQ854815-1|ABI75145.1|  112|Homo sapiens
           hyperpolarization-activated cyclic nucleotide-gated
           potassium channel 2 protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 604 GAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGP 714
           G  PG   +P   P PPP  P      P     P GP
Sbjct: 11  GESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGP 47


>AJ133727-1|CAB42630.1|  889|Homo sapiens
           hyperpolarization-activated cyclic nucleotide-gated
           channel hHCN2 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 604 GAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGP 714
           G  PG   +P   P PPP  P      P     P GP
Sbjct: 11  GESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGP 47


>AJ012582-1|CAB42602.1|  889|Homo sapiens
           hyperpolarization-activated cation channel HCN2 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 604 GAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGP 714
           G  PG   +P   P PPP  P      P     P GP
Sbjct: 11  GESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGP 47


>AC005559-2|AAC33280.2|  528|Homo sapiens hyperpolarization
           activated cyclic nucleotide-gated potassium channel 2
           protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +1

Query: 604 GAXPGXXXSPXXXPXPPPLXPXXXXXXPRXXXSPXGP 714
           G  PG   +P   P PPP  P      P     P GP
Sbjct: 11  GESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGP 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,038,775
Number of Sequences: 237096
Number of extensions: 775591
Number of successful extensions: 2070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2036
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)