Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F16
         (843 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    30   3.5  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    30   3.5  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = -2

Query: 710 PXGEXXXRGXXXXLXGXSGGGXGXXXGEXXXPGXAPXDXXXREAXGXXXXXXDRGXXGG* 531
           P G     G      G +GGG G   G     G AP         G        G  GG 
Sbjct: 256 PGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGGGFGGQGGGGGFGGGG 315

Query: 530 XRXGXXGCPXXXG 492
            R G  G P   G
Sbjct: 316 GRGGAPGAPGSPG 328


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = -2

Query: 710 PXGEXXXRGXXXXLXGXSGGGXGXXXGEXXXPGXAPXDXXXREAXGXXXXXXDRGXXGG* 531
           P G     G      G +GGG G   G     G AP         G        G  GG 
Sbjct: 328 PGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGGGFGGQGGGGGFGGGG 387

Query: 530 XRXGXXGCPXXXG 492
            R G  G P   G
Sbjct: 388 GRGGAPGAPGSPG 400


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,412,960
Number of Sequences: 53049
Number of extensions: 226484
Number of successful extensions: 627
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)