Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_F09
(802 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.062
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 30 0.44
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.8
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 26 5.4
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 7.2
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.5
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.5
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.062
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = -3
Query: 728 SPLCIKPPXPCDXRXHQPDHQIPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEA 549
+P I PP P P + P H P+ P +S +P P + P + P LSS+A
Sbjct: 965 APPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLAR--VPPV-PKLSSKA 1021
Query: 548 PSAYLTPSS 522
P L PS+
Sbjct: 1022 PPVPL-PSA 1029
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.9 bits (64), Expect = 0.44
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -3
Query: 680 QPDHQ-IPXFHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTPSSLGMXK 507
QP HQ FHTPT P T +S +P + + PLS +A S LT S L +
Sbjct: 130 QPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTSSPLKDFQ 187
Query: 506 GVSPPYFQVNDESQA 462
SPP V +S +
Sbjct: 188 S-SPPLSTVLQKSHS 201
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 101 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 229
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.9 bits (59), Expect = 1.8
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Frame = -3
Query: 761 PLXXXAXXLAVSPLCIKPPXPCDXRXHQPDHQIPXFHTPTTPDLTSISINPLTPY*KEFA 582
PL A + SP P P H P P +T+ + P + +EF
Sbjct: 306 PLPSAAPPIPFSPNVSSHPHMAFLPATVPTHSAPPGFVPYDFPITNDKMYPSPSFQEEFP 365
Query: 581 PGLKPPL----SSEAPSAYLTPS--SLGMXKGVSPPYFQVNDESQASRLISRHST 435
K P SS AP + PS S + P + D+SQ + + + +T
Sbjct: 366 STSKSPSATPGSSNAPVVDMHPSADSATYPTSIYPSNVRARDDSQQAYISANMTT 420
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 256 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 161
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -1
Query: 355 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 176
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 175 LSASIQASLPSSEIYRQL 122
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -3
Query: 671 HQIPXFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSAYL 534
H P P+TP + SI+P TP Y + A L PLS + +AYL
Sbjct: 295 HCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTAYL 345
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 466 KLRALLVVIPRILRSPPPTHPLIEDV 389
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 143 LRDLPPVGRSSPCFFRLLWSLRKILIPYSSQFW 45
L++L +G SPC RL L +++P FW
Sbjct: 21 LKELQHIGVPSPCNLRLYHELISVIVP---TFW 50
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 331 LVTHKELALKVSSIIGTRVYVFDPSCY 251
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 471 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 385
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 116 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 217
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,869,835
Number of Sequences: 5004
Number of extensions: 56497
Number of successful extensions: 159
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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