Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F09
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical pr...    36   0.026
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    29   5.1  
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ...    28   6.8  
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ...    28   6.8  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   8.9  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   8.9  

>Z75714-2|CAB00059.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC434.3 protein.
          Length = 474

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 710 PPXPCDXRXHQPDHQIPXFHTPTTPDLTSISINPLTPY*KEFAPGL 573
           PP P   +  Q D+ +P F+ P  P   + S++PL P+  +++ GL
Sbjct: 34  PPNPAPFKPRQEDYNLPPFYQP-NPGRDASSLSPLFPFHSQYSNGL 78


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -3

Query: 665 IPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 543
           +P   T  TP+LT++++ P+T   K     + P  +++ P+
Sbjct: 173 VPLVLTTLTPELTTVTVEPITSTLKPTTTTITPTTTTKLPT 213


>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
           protein 25, isoformb protein.
          Length = 1130

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 548 EPLMTTEALTPARTPSSTASE 610
           EP++++E L P R PS+T S+
Sbjct: 877 EPILSSEVLQPTRLPSATTSQ 897


>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
            protein 25, isoforma protein.
          Length = 1237

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 548  EPLMTTEALTPARTPSSTASE 610
            EP++++E L P R PS+T S+
Sbjct: 984  EPILSSEVLQPTRLPSATTSQ 1004


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 566  PLSSEAPSAYLTPSSLGMXKGVSPP 492
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,931,427
Number of Sequences: 27780
Number of extensions: 321913
Number of successful extensions: 952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)