Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_F06
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 151 5e-37
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 151 5e-37
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 151 5e-37
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 151 5e-37
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 151 5e-37
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 151 5e-37
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 151 5e-37
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 151 5e-37
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 KTXQG 554
KT +G
Sbjct: 243 KTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 KTXQG 554
KT +G
Sbjct: 243 KTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 568 KTXQG 554
KT +G
Sbjct: 145 KTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -3
Query: 667 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 554
V A +MID I TSRWHTKKLPRKT +G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 KTXQG 554
KT +G
Sbjct: 243 KTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 259 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 568 KTXQG 554
KT +G
Sbjct: 145 KTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 309 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 240
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -3
Query: 667 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 554
V A +MID I TSRWHTKKLPRKT +G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 151 bits (367), Expect = 5e-37
Identities = 69/100 (69%), Positives = 83/100 (83%)
Frame = -2
Query: 395 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 216
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 215 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 357 HEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 582 RSYPVRHXKXLRKVACIGAWHPSRVSFTVXRAGQKGYHHRTEMNKKIYRIG 430
+ P + K LRKVACIGAWHPSRV+FTV RAGQKG+HHRT +N KIYRIG
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = -3
Query: 748 IQLXGVPSRTK*NGPENIXEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPR 569
IQ+ G K + EK + VD+VFAQDEMID I TSRWHTKKLPR
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 568 KTXQG 554
KT +G
Sbjct: 243 KTHKG 247
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 372 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSD 485
IL R ++F FAI F RF+C Y +LSD
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSD 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,653,631
Number of Sequences: 27780
Number of extensions: 374682
Number of successful extensions: 930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -