Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_F05
(829 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 223 1e-58
06_02_0263 - 13566621-13569875 118 4e-27
02_02_0572 + 11667455-11670783,11672026-11672419 118 6e-27
05_04_0174 - 18728199-18731411 104 1e-22
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 94 1e-19
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 93 2e-19
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 79 4e-15
11_03_0216 + 11821726-11821860,11823217-11823286,11823704-118238... 68 8e-12
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 63 3e-10
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 54 1e-07
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 42 8e-04
08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204 33 0.28
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 31 1.5
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 31 1.5
04_03_0455 - 16085401-16085775 29 3.4
01_06_1568 - 38299113-38299790,38300165-38300254,38300368-383004... 29 3.4
03_02_1021 + 13254765-13255092,13255201-13255355 29 4.5
11_06_0374 + 22877325-22878500,22879898-22880014,22880131-228803... 29 6.0
04_03_0229 - 13006869-13007017,13007925-13008089,13008178-130083... 29 6.0
01_05_0648 + 23915469-23915898,23916551-23916619,23916956-239173... 29 6.0
02_05_0880 + 32466538-32467083,32467333-32467644,32467731-324682... 28 7.9
02_03_0246 - 16807619-16808145,16808208-16808868 28 7.9
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 28 7.9
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 223 bits (545), Expect = 1e-58
Identities = 93/140 (66%), Positives = 110/140 (78%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++Y QW WC +HF+H K +RK REVR QL DIL+ ++PL SC +WD VRK
Sbjct: 1106 NVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDVVRKA 1165
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
ICSAYF AARLKG+GEYVNCR GMPCHLHP+SAL+GLG +PDYVVYHEL +T +EYM C
Sbjct: 1166 ICSAYFHNAARLKGVGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKEYMQC 1225
Query: 315 VTAVDARWLAELGPMFFSVQ 256
VTAVD +WLAELGPMFFSV+
Sbjct: 1226 VTAVDPQWLAELGPMFFSVK 1245
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 779 SXPSXFYRXQXREEEADAVKEKXQXP 702
S PS F+R + R EE+DA +EK P
Sbjct: 1072 SVPSVFFRPKDRAEESDAAREKFFVP 1097
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 118 bits (285), Expect = 4e-27
Identities = 57/148 (38%), Positives = 83/148 (56%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCI 493
+Y W WC E+FV ++R+ ++VR+QL +I+ + +L +VS G D VRK I
Sbjct: 914 VYQAWKAKQFSGPWCYENFVQLTSLRRAQDVRKQLLEIMDKYKLNVVSAGNDLTKVRKAI 973
Query: 492 CSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCV 313
+ +F AAR G Y ++HP SALF P++V+YHE+ MT +EYM V
Sbjct: 974 TAGFFFHAARKDPQGGYRTIADHQQVYIHPASALFQQ--QPEWVIYHEVVMTTKEYMREV 1031
Query: 312 TAVDARWLAELGPMFFSVQGDRQIESRQ 229
TA+D RWL EL P F+ +I R+
Sbjct: 1032 TAIDPRWLVELAPRFYRSADPTKISKRK 1059
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 118 bits (284), Expect = 6e-27
Identities = 54/148 (36%), Positives = 85/148 (57%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCI 493
+Y W WC E+FV ++++R+ ++VR+QL I+ + +L +VS G ++ +RK I
Sbjct: 1070 VYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTKIRKAI 1129
Query: 492 CSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCV 313
+ +F AAR Y P ++HP+SALF PD+V+YHEL MT +EYM V
Sbjct: 1130 TAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREV 1187
Query: 312 TAVDARWLAELGPMFFSVQGDRQIESRQ 229
T +D +WL EL P F+ ++ R+
Sbjct: 1188 TVIDPKWLTELAPRFYKSADPTKMSKRK 1215
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 104 bits (249), Expect = 1e-22
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRL-PLVSC-GTDWDTVR 502
++YN W ++ QWC E FV + MR+ R+VR QL +L++ + P S G D D VR
Sbjct: 892 NVYNAWAESGYSPQWCRESFVQHRTMRRARDVRDQLGALLERVEIAPCSSAGGGDLDAVR 951
Query: 501 KCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYM 322
K + + YF+ AARL+ G Y ++ +HP+S + P + +YHEL +T +EYM
Sbjct: 952 KAVTAGYFRHAARLQRDGSYRAVKSRQTVFVHPSSGV--AQAPPRWALYHELVLTTKEYM 1009
Query: 321 HCVTAVDARWLAELGPMFF 265
VT + WL E+ P ++
Sbjct: 1010 RQVTELKPEWLVEIAPHYY 1028
>06_01_0645 +
4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/128 (32%), Positives = 74/128 (57%)
Frame = -2
Query: 639 SQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARL 460
++WC E+F++ +++R +V Q++ +QQ L + SCG D R+C+ +A+F AA
Sbjct: 572 NRWCRENFINYRSLRHACDVHSQIQGHVQQMGLNVSSCGDDMVLFRRCLTAAFFLNAAMR 631
Query: 459 KGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAEL 280
+ G Y T +HP+S LF PD +++EL T++ Y+ +T +D WLAEL
Sbjct: 632 QPDGSYRALATSQSVQIHPSSVLFQK--KPDCAIFNELVRTSQNYVKDLTRIDPVWLAEL 689
Query: 279 GPMFFSVQ 256
P +++ +
Sbjct: 690 APQYYATE 697
>03_02_0789 + 11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDT---- 508
++Y+ + Q QWC E+F++A+A++ VRQQL I+ R L C TD+++
Sbjct: 555 NVYHAYKQNNEDPQWCYENFINARALKSADNVRQQLVRIM--TRFNLKMCSTDFNSREYY 612
Query: 507 --VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTA 334
+RK + + YF Q A L+ G Y+ + HLHP++ L P++V+Y+E +T
Sbjct: 613 VNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC---LDHKPEWVIYNEYVLTT 669
Query: 333 REYMHCVTAVDARWLAELGPMFFSVQGDRQIESRQ 229
R ++ V + WL ++ P ++ + E+++
Sbjct: 670 RNFIRTVMDIRGDWLIDVAPHYYDLSNFPSCEAKR 704
>08_02_0259 - 14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 79.0 bits (186), Expect = 4e-15
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 20/160 (12%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHA--------------------KAMRKVREVRQQLKDIL 556
++YN W +T +QWC E+++ + ++M++ R++R QL+ +L
Sbjct: 901 NVYNSWKETDYSTQWCYENYIQSPNGKYQLFEGCQLQNIVILVRSMKRARDIRDQLEGLL 960
Query: 555 QQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGC 376
++ + + S +D D ++K I S +F ++RL+ G Y + +P + L
Sbjct: 961 ERVEIEISSNASDLDAIKKAITSGFFHHSSRLQKNGSYRTVK-------NPQTVL----- 1008
Query: 375 SPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVQ 256
P +V+YHEL +T +EYM VT + WL E+ P ++ ++
Sbjct: 1009 -PRWVIYHELVLTTKEYMRQVTELKPDWLVEIAPHYYQLK 1047
>11_03_0216 +
11821726-11821860,11823217-11823286,11823704-11823861,
11824304-11824479,11824564-11824612,11825293-11825430
Length = 241
Score = 68.1 bits (159), Expect = 8e-12
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQ--------QRLPLVSCGTD 517
++ W++T +WC++H + + M+ ++VR QL I+Q+ Q D
Sbjct: 25 IFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDVQAKKERKSDPD 84
Query: 516 WDTVRKCICSAYFQQAAR--LKGIGEYVNCRTGMPCHLHPTSALFG--LGCSPDYVVYHE 349
+ +R+ +C Y Q A L G + +HP S L G G P YVVYHE
Sbjct: 85 YRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYGKLPVYVVYHE 144
Query: 348 LTMTAREYMHCVTAVDARWL 289
L T R +M V+AVD W+
Sbjct: 145 LINTTRPFMRNVSAVDQSWV 164
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 62.9 bits (146), Expect = 3e-10
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = -2
Query: 609 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCR 430
A A +KV ++R+QL I+++ +PL SC D + VRK I + F A L+ G + +
Sbjct: 436 AAAEKKVIDIREQLVRIIKRFGIPLTSCDRDMEAVRKAIIAGAFAYACHLE--GRFYSHT 493
Query: 429 TGMPCHLHPTSALF--GLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFF 265
+ P + +L + +P +V+Y L T + YM V A++ WL E P F+
Sbjct: 494 S--PTYSQNVISLKKPNIRVNPKWVIYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFY 548
>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = -2
Query: 672 LYNQW-NQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDT---- 508
+Y +W ++ + WC ++ ++AK MR+ +E L++ L+ + +V W+
Sbjct: 759 VYKEWEDEHENRNTWCWQNSINAKTMRRCQETISDLENCLRHELNIIVPSYWCWNPEEST 818
Query: 507 -----VRKCICSAYFQQAARLKGIGE--YVNCRTGMPCHLHPTSALFGLGCSPDYVVYHE 349
+++ I ++ A G Y T LHP+ +L P++VV+ E
Sbjct: 819 VHDKLLKRIILTSLSGNIAMFSGHERFGYQVISTDQAVKLHPSCSLLIYDSKPEWVVFTE 878
Query: 348 LTMTAREYMHCVTAVDARWLAELGPM 271
+ +Y+ CVTA+D L + PM
Sbjct: 879 ILSVPNQYLVCVTAIDPDALCSIHPM 904
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -2
Query: 444 YVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWL 289
Y +C +LH +S++ + +P++VVY EL T R YMH VT+V W+
Sbjct: 1013 YQSCAFNDTIYLHRSSSVARI--APEFVVYSELLHTKRSYMHGVTSVKPGWI 1062
>08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204
Length = 449
Score = 33.1 bits (72), Expect = 0.28
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 304 HGGDAVHVLARRHGELVVHHVVGAAAQPE 390
H H+LA RHG L VH V +A +P+
Sbjct: 323 HFTQGEHILAHRHGSLYVHRCVSSATRPQ 351
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 30.7 bits (66), Expect = 1.5
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Frame = +1
Query: 274 GPQLGQ------PARVHGGDAVHVLARRHGELVVHHVVGAA------AQPEQRRGGVQVA 417
GP LGQ PA DA + E+ V + +A A P G +V
Sbjct: 12 GPMLGQVLRRLRPATAAAADAARAYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVG 71
Query: 418 RHAGA--AVHVLADALQPRRLLEVS*TDAFPDGVPVGAAGHERQP 546
+ GA L D P R+L+ T+A G+ VGAA +P
Sbjct: 72 EYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRP 116
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 349 LVVHHVVGAAAQPEQRRGG--VQVARHAGAAVHVLADALQPRRL 474
L H VG Q EQRRGG Q+A+ ++H L ++ R++
Sbjct: 952 LSAHSAVGVDIQAEQRRGGQSAQLAQELNLSLHDLVPRMRERQV 995
>04_03_0455 - 16085401-16085775
Length = 124
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 378 SPARTAPRWGAGGTACRCGSSRTRRCPSAAP 470
S A ++ G GGTA ++R RRCP P
Sbjct: 91 SAAASSDSDGYGGTAAATSTTRRRRCPEQVP 121
>01_06_1568 -
38299113-38299790,38300165-38300254,38300368-38300484,
38300600-38300962
Length = 415
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 208 WTAASLRLSRFDLPVSLXGEEHGPQLGQPARVHGGDAVHVLARRHGELVVHHVVGAAAQP 387
W+AA+ R LP + ++H + G ARV G A A R G + V G +P
Sbjct: 2 WSAAAARTVT-PLPAASPLQQHQQRRGAWARVGNGRAASTTAARAG--LWDFVGGDLVKP 58
Query: 388 EQRRGGVQVARHAGAAVH 441
+ R V +H A++
Sbjct: 59 DMGRWLDDVEKHKSLAIY 76
>03_02_1021 + 13254765-13255092,13255201-13255355
Length = 160
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 478 PAGGAAEGHRRVRELPHRHAVPPAPHLGAVRAGLQPRLRGVPR 350
P GG A R +RE P RH+ P + G+ R+G PR+ PR
Sbjct: 121 PKGGDAP--RGLREKP-RHSEKPTKYAGSPRSGGAPRVIHQPR 160
>11_06_0374 +
22877325-22878500,22879898-22880014,22880131-22880322,
22880742-22880783
Length = 508
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = +1
Query: 277 PQLGQPARVHGGDAVHV-------LARRHGELV-VHHVVGAAAQPEQRRGGVQVARHAGA 432
P LG R G+ VHV + R HGE V V HVV +P + G+ + A
Sbjct: 313 PALGGEVRREHGEEVHVEPAPGGEVRREHGEEVHVEHVVVLDHEPVEATAGLVLGAPVPA 372
Query: 433 AVHVLADALQPRRL 474
AV A L+ R L
Sbjct: 373 AVR--AAVLEARAL 384
>04_03_0229 -
13006869-13007017,13007925-13008089,13008178-13008332,
13010276-13011021
Length = 404
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/44 (47%), Positives = 22/44 (50%)
Frame = -1
Query: 481 LPAGGAAEGHRRVRELPHRHAVPPAPHLGAVRAGLQPRLRGVPR 350
LPA AA G R LP AV P P + R GLQ R R V R
Sbjct: 200 LPASAAANG--RHLSLPVSVAVAPHPCCQSPRRGLQVRGREVER 241
>01_05_0648 +
23915469-23915898,23916551-23916619,23916956-23917315,
23918435-23918973
Length = 465
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +1
Query: 262 GEEHGPQLGQPARVHGGDAVHVLARRHGELVVHHVVG----AAAQPEQRRGGVQVARHAG 429
G Q GQ A GG V VLA G VV VV AAA RRGGV R
Sbjct: 322 GGRRRDQAGQAAG-GGGGVVEVLAATCGHAVVVAVVVVVAVAAAAAGSRRGGVPQLRATT 380
Query: 430 AA 435
AA
Sbjct: 381 AA 382
>02_05_0880 +
32466538-32467083,32467333-32467644,32467731-32468201,
32468481-32469246,32469332-32469774
Length = 845
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 430 HRHAVPPAPHLGAVRAGLQPRLRGVPRAHHD 338
H H V PAPH GA +G P G H D
Sbjct: 67 HGHHVSPAPH-GAGSSGGSPVFHGAGAGHRD 96
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 366 SRGCSPARTAPRWGAGGTACRCGSSRTRRCPSAAP 470
SR C +R A R C CG R PSA+P
Sbjct: 99 SRSCRSSRMAARCWPCRPPCCCGRRRRAASPSASP 133
>01_06_0840 + 32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 28.3 bits (60), Expect = 7.9
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Frame = -2
Query: 639 SQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLV---SC---GTDWDTVRKCICSAYF 478
+Q+C+++FV + M + +R+QL++ L Q+ V +C D +R + + +
Sbjct: 911 AQFCSKYFVSSNTMNMLSNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGAY 970
Query: 477 QQAARL----KGIGE-YVNCRTGMPCHLHPTSALFGLG----CSPDYVVYHELT 343
RL K + +G LHP S F L V+Y E+T
Sbjct: 971 PMVGRLLPPRKNTRRAVIETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEIT 1024
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,281,751
Number of Sequences: 37544
Number of extensions: 384658
Number of successful extensions: 1751
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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