Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_F05
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 225 4e-59
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 225 4e-59
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 126 2e-29
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 126 2e-29
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 98 6e-21
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 98 6e-21
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 98 6e-21
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 68 7e-12
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 68 7e-12
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 51 9e-07
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 33 0.25
U42839-5|AAM54196.1| 133|Caenorhabditis elegans Hypothetical pr... 30 1.8
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 30 2.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.3
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.1
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 4.1
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 5.4
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 28 9.4
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 225 bits (549), Expect = 4e-59
Identities = 96/144 (66%), Positives = 119/144 (82%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++Y QW ++WC ++++H KA++KVREVR QLK+I+Q +LPL+S G++WD VRKC
Sbjct: 923 NVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKC 982
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
ICSAYF AARLKGIGEYVN RTG+PC LHPTSALFG+G PDYVVYHEL MTA+EYM C
Sbjct: 983 ICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQC 1042
Query: 315 VTAVDARWLAELGPMFFSVQGDRQ 244
VTAVDA WLAELGPMF+S++ +Q
Sbjct: 1043 VTAVDAIWLAELGPMFYSIKESKQ 1066
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -3
Query: 824 EXGXSXXXXIXXXXXSXPSXFYRXQXREEEADAVKEKXQXP 702
E G S S P+ F+R + REEEADA KEK Q P
Sbjct: 874 EMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVP 914
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 225 bits (549), Expect = 4e-59
Identities = 96/144 (66%), Positives = 119/144 (82%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++Y QW ++WC ++++H KA++KVREVR QLK+I+Q +LPL+S G++WD VRKC
Sbjct: 923 NVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVRKC 982
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
ICSAYF AARLKGIGEYVN RTG+PC LHPTSALFG+G PDYVVYHEL MTA+EYM C
Sbjct: 983 ICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKEYMQC 1042
Query: 315 VTAVDARWLAELGPMFFSVQGDRQ 244
VTAVDA WLAELGPMF+S++ +Q
Sbjct: 1043 VTAVDAIWLAELGPMFYSIKESKQ 1066
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -3
Query: 824 EXGXSXXXXIXXXXXSXPSXFYRXQXREEEADAVKEKXQXP 702
E G S S P+ F+R + REEEADA KEK Q P
Sbjct: 874 EMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVP 914
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 126 bits (304), Expect = 2e-29
Identities = 57/141 (40%), Positives = 85/141 (60%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCI 493
+YN W WC E+F+ ++M++ +++R+QL I+ + +L +VSCG D V+K I
Sbjct: 1023 VYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAI 1082
Query: 492 CSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCV 313
CS +F+ AA+ Y G ++HP+SA F P++VVYHEL MT +EYM V
Sbjct: 1083 CSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQ--QPEWVVYHELVMTTKEYMREV 1140
Query: 312 TAVDARWLAELGPMFFSVQGD 250
TA+D +WL E P FF + GD
Sbjct: 1141 TAIDPKWLVEFAPSFFKI-GD 1160
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 126 bits (304), Expect = 2e-29
Identities = 57/141 (40%), Positives = 85/141 (60%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCI 493
+YN W WC E+F+ ++M++ +++R+QL I+ + +L +VSCG D V+K I
Sbjct: 1023 VYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAI 1082
Query: 492 CSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCV 313
CS +F+ AA+ Y G ++HP+SA F P++VVYHEL MT +EYM V
Sbjct: 1083 CSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQ--QPEWVVYHELVMTTKEYMREV 1140
Query: 312 TAVDARWLAELGPMFFSVQGD 250
TA+D +WL E P FF + GD
Sbjct: 1141 TAIDPKWLVEFAPSFFKI-GD 1160
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/137 (32%), Positives = 79/137 (57%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++YN+W +++ +WC E++V + M++ R+VR QL +L++ + S TD +RK
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKA 907
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
I + YF ++L G Y + H HP S LF +P +VVY EL T++E+M
Sbjct: 908 ITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMRE 965
Query: 315 VTAVDARWLAELGPMFF 265
++ +++ WL E+ P ++
Sbjct: 966 MSEIESGWLLEVAPHYY 982
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/137 (32%), Positives = 79/137 (57%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++YN+W +++ +WC E++V + M++ R+VR QL +L++ + S TD +RK
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKA 907
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
I + YF ++L G Y + H HP S LF +P +VVY EL T++E+M
Sbjct: 908 ITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMRE 965
Query: 315 VTAVDARWLAELGPMFF 265
++ +++ WL E+ P ++
Sbjct: 966 MSEIESGWLLEVAPHYY 982
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/137 (32%), Positives = 79/137 (57%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKC 496
++YN+W +++ +WC E++V + M++ R+VR QL +L++ + S TD +RK
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKS-STDTIKIRKA 907
Query: 495 ICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHC 316
I + YF ++L G Y + H HP S LF +P +VVY EL T++E+M
Sbjct: 908 ITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEE--TPRWVVYFELVFTSKEFMRE 965
Query: 315 VTAVDARWLAELGPMFF 265
++ +++ WL E+ P ++
Sbjct: 966 MSEIESGWLLEVAPHYY 982
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 79.8 bits (188), Expect = 2e-15
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDT---- 508
++Y+ + Q QWC ++F++ + M+ VR QL ++ + L VS TD+ +
Sbjct: 573 NVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVS--TDFKSRDYY 630
Query: 507 --VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTA 334
+RK + + +F Q A L+ G YV + +LHP++ L P++ +Y+E +T
Sbjct: 631 LNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL---DHKPEWALYNEFVLTT 687
Query: 333 REYMHCVTAVDARWLAELGPMFFSV 259
+ ++ VT V WL ++ P ++ +
Sbjct: 688 KNFIRTVTDVRPEWLLQIAPQYYDL 712
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDT---- 508
++Y+ + Q QWC ++F++ + M+ VR QL ++ + L VS TD+ +
Sbjct: 573 NVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVS--TDFKSRDYY 630
Query: 507 --VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTA 334
+RK + + +F Q A L+ G YV + +LHP++ L P++ +Y+E +T
Sbjct: 631 LNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTV---LDHKPEWALYNEFVLTT 687
Query: 333 REYMHCVTAV 304
+ ++ VT V
Sbjct: 688 KNFIRTVTDV 697
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 68.1 bits (159), Expect = 7e-12
Identities = 36/162 (22%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCG---TDWDTV 505
+++ ++ + +WC++HFV+ + + + VR QL +L++ + VS + +
Sbjct: 569 NVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSENI 628
Query: 504 RKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREY 325
R+C+ + +F QAA+ G+Y+ + P +++ S++ P +V++ E+ ++
Sbjct: 629 RQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEV---MQDS 685
Query: 324 MHCVTAVDARWLAELGPMFFSVQGDRQIESRQA*RSSGPPPT 199
+ VT ++ WL EL P ++ + ++ + R GP T
Sbjct: 686 IRDVTVIEPEWLYELAPHYYEFGTEGELAEK---RMRGPAAT 724
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical protein
T05E8.3 protein.
Length = 856
Score = 51.2 bits (117), Expect = 9e-07
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Frame = -2
Query: 672 LYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCI 493
L ++NQT ++C ++ ++ + ++ + +QLK I +Q++ +CG D+ +RK +
Sbjct: 690 LEREYNQTIR--KFCNDNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKAL 747
Query: 492 CSAYFQQAARL-KGIGEY-VNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMH 319
F + + Y + + +HP+S L P Y+V+ EL T +
Sbjct: 748 ALGMFLNSCEYDRQEDRYRLMINPAITLKIHPSSCL--SRSKPAYIVFSELMKTNDLFAL 805
Query: 318 CVTAVDARWLAEL 280
VT +D W+ L
Sbjct: 806 QVTLIDGDWVRPL 818
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = -2
Query: 675 HLYNQWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVS 529
+++ ++ + +WC++HFV+ + + + VR QL +L++ + VS
Sbjct: 95 NVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVS 143
>U42839-5|AAM54196.1| 133|Caenorhabditis elegans Hypothetical
protein F11C7.6a protein.
Length = 133
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 362 WCTTSSP*RRASTCTASPPWTRAGWPSWGPCSSPXKETGKSNRDKRKE 219
+C+TS RA T W +WG CS GK NR + E
Sbjct: 16 YCSTSPLQNRAKRAACDS--TYGAWSAWGECSMNCGYCGKQNRTRTCE 61
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 372 PDYVVYHELT-MTAREYMHCVTAVDARWLAELGPMF 268
P++V+Y EL + ++ M V AVD WL+ L +
Sbjct: 955 PEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESY 990
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -2
Query: 639 SQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTV 505
+Q+C +HF++ MR V+ R+QL L + +L +S D TV
Sbjct: 963 NQFCRDHFLNFSTMRMVQGTRRQLLRELVRAKLINISPNRDVLTV 1007
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 474
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 704 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 759
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 307 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 474
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 530 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 585
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 609 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 511
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 609 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 511
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 554 NSSGCRSCPAAPTGTP 507
+SSGC +CPA P G+P
Sbjct: 134 SSSGCITCPAGPMGSP 149
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 609 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 511
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 560 FCNSSGCRSCPAAPTGTPSGNAS 492
F + +GC CPA P G+P + S
Sbjct: 120 FMSPTGCIRCPAGPPGSPGDHGS 142
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 296 AGWPSWGPCSSPXKETGK 243
+ W SWG C P ++TGK
Sbjct: 32 SNWSSWGKCVWPDQKTGK 49
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -3
Query: 332 ASTCTASPPWTRAGWPSWGPCSSPXKETGKSNRDKR 225
+ C A P T W SW CS G R ++
Sbjct: 131 SQACNAQPCCTWTAWSSWSACSVTCGSGGSITRSRQ 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,619
Number of Sequences: 27780
Number of extensions: 270582
Number of successful extensions: 955
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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