Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F05
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   6.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   8.0  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 211 TAASLRLSRFDLPVSLXGEEHGPQLGQPARVH 306
           T  +  ++R DLP+S+   + G  +G   RVH
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVH 659


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 435 CRTGMPCHLHPTSALFGLG 379
           CR    C  HPT+A    G
Sbjct: 114 CRNFSTCSSHPTAAFISYG 132


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 435 CRTGMPCHLHPTSALFGLG 379
           CR    C  HPT+A    G
Sbjct: 113 CRNFSTCSSHPTAAFISYG 131


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -2

Query: 663 QWNQTTTXSQWCTEHFVHAKAMRKVREVRQQLKDILQQQR 544
           Q  Q     Q  T+H ++A+  ++ ++ +QQ +   QQQ+
Sbjct: 419 QAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQ 458


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,161
Number of Sequences: 438
Number of extensions: 3399
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)