Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_F03
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   240   9e-64
Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF040660-7|AAN65287.1|  366|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical ...    29   5.1  
AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical ...    29   5.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  240 bits (587), Expect = 9e-64
 Identities = 113/196 (57%), Positives = 136/196 (69%)
 Frame = -2

Query: 712 GSIARTTFPRVGDFNESXLLXWKVTXGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGA 533
           G   +   PRVGDFNES     + T GHPVF T+YG+I +NIC+GRHH  NWMM+  NGA
Sbjct: 194 GRSRKNHIPRVGDFNESTYYM-ESTLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGA 252

Query: 532 EIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHK 353
           EI+FNPSAT+     SE +W +EARNAAI N  FT  INRVG E FPNEFTS +G+PAHK
Sbjct: 253 EIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGINRVGTEVFPNEFTSGNGQPAHK 310

Query: 352 DLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQRLDMYVNS 173
           D G FYGSSY   PDG R P LSR R+G+LIA +DLNL RQ +D   + MT RLDMY   
Sbjct: 311 DFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLCRQCKDAWGFRMTNRLDMYAQK 370

Query: 172 LSKVLELDYKPQVVHE 125
           +++V   DY+P +  E
Sbjct: 371 ITEVSNPDYRPDIRRE 386



 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 789 ILERXEKHSDXLWNTAXSLGHRKRDREASQEPH 691
           ILER E+  D +WNTA  + H  R    S++ H
Sbjct: 168 ILERDEEKDDVIWNTAVVISHTGRVIGRSRKNH 200


>Z81512-1|CAB04173.1|  601|Caenorhabditis elegans Hypothetical
           protein F25C8.1 protein.
          Length = 601

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +2

Query: 461 SFNVPHVLAAAFSGDRR*RIKNDLSSILSEHHPVQDVVPSEADVHRDLAVSGREYRMAG 637
           SFNV  +    + G++R + + ++   + +H  +QD+ P+   + RD  +     ++AG
Sbjct: 21  SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPF-MSRDELIDNSVRKLAG 78


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 175 CSRTCPGVGSCNNNVCL*SVCSGSSPRPRLTSRLWC 282
           C++TC G  S     CL S CSG S R ++ ++  C
Sbjct: 35  CTKTCGGGVSRQLRRCLTSKCSGESVRFKVCAQKTC 70


>AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical
           protein W05G11.6d protein.
          Length = 594

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -2

Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           WM FG +G     NP A   G   G+ +  N  A  +   N  FT        E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387


>AF040660-7|AAN65287.1|  366|Caenorhabditis elegans Hypothetical
           protein W05G11.6c protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -2

Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           WM FG +G     NP A   G   G+ +  N  A  +   N  FT        E F
Sbjct: 47  WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102


>AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical
           protein W05G11.6b protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -2

Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           WM FG +G     NP A   G   G+ +  N  A  +   N  FT        E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277


>AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical
           protein W05G11.6a protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = -2

Query: 559 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 395
           WM FG +G     NP A   G   G+ +  N  A  +   N  FT        E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,407
Number of Sequences: 27780
Number of extensions: 331884
Number of successful extensions: 960
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)