Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_E20
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 100 1e-20
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 100 1e-20
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 100 1e-20
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 100 1e-20
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 100 1e-20
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 100 1e-20
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 100 1e-20
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 45.6 bits (103), Expect = 2e-04
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNY--NVKKE 237
K +KK++I+QG LDK+G P + TP W YV+Y + KKE
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKE 426
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 99.5 bits (237), Expect = 1e-20
Identities = 42/65 (64%), Positives = 53/65 (81%)
Frame = -2
Query: 534 GXEXDQXMVIVTXXGEALAXXVALMTTCTMASCDHGXAAKLKRVIMERDTYPRKWGLGPK 355
G E +Q +V++T GEA+ +ALMTT +++CDHG AK+KRVIMERDTYPRKWGLGPK
Sbjct: 326 GIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGIVAKIKRVIMERDTYPRKWGLGPK 385
Query: 354 ASQEK 340
ASQ+K
Sbjct: 386 ASQKK 390
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Frame = -3
Query: 356 KPHKKKILIQQGKLDKYGXPNEXTPKEWLNSYVNYN----------VKKEPE-NGDGVEE 210
K +KK++I+QG LDK+G P + TP W YV+Y+ V K P+ + +
Sbjct: 385 KASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDYSESAKKEVVAEVVKAPQVVAEAAKT 444
Query: 209 GSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQ 45
RKR + + + E P + + +K+E + ++A E+ A +S T ++
Sbjct: 445 AKRKRESESESDETPPAAPQLIKKEKKKSKKDKKAKAGLESGAEPGDGDSDTTKKK 500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,215,295
Number of Sequences: 237096
Number of extensions: 1773684
Number of successful extensions: 3788
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3756
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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